Portunus trituberculatus (swimming crab): 123501909
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Entry
123501909 CDS
T07853
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like isoform X1
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03020
RNA polymerase
ptru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123501909
09124 Replication and repair
03420 Nucleotide excision repair
123501909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptru03021
]
123501909
03400 DNA repair and recombination proteins [BR:
ptru03400
]
123501909
Transcription machinery [BR:
ptru03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123501909
DNA repair and recombination proteins [BR:
ptru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123501909
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
123501909
NCBI-ProteinID:
XP_045106922
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All DBs
Position
10:4524982..4533345
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AA seq
275 aa
AA seq
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MPYANQPSLNLMELTEENIKFSIEDTDLSVANSIRRILMAETPTIAIDWVQLEENSTVLS
DEFIAHRIGLIPFTSDERIEQMQYSRDCSCTDYCPECSVEFTLDVKCQDDHTRQITTADL
KSSDARVIPVTSRHREDEASEYGESDDILIVKLRKGQSLRLRAYAVKGFGKEHAKWNPTS
SVAFEYDPDNALRHTLLPKPEEWPKSEYSALDENTPQSEFDPSGKPNKYFFNVESSGSLK
PENIILMGIAALKKKLSDLQNQLSMEAQSDALAIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccttacgccaaccagccttccttgaacctgatggagctgacggaggaaaatatcaag
ttttcaatagaggacactgatctgagcgtggccaacagcatccgtcgcatcctgatggcg
gagaccccgaccatcgccatagactgggtgcagctggaagagaactcgacagtgctcagt
gacgagttcatcgctcatcgcatcggcctcattcccttcacctcggacgaacggattgag
cagatgcagtactctagggactgttcctgcaccgactactgcccggagtgttctgtggag
ttcaccttggacgttaagtgccaggatgaccataccaggcagatcaccaccgctgacctc
aaatcctctgacgcgcgggtcatccctgtcacctcaaggcaccgtgaggacgaggccagc
gagtatggcgaaagtgacgacatactcatcgtcaagcttcggaagggccagtcgctgcgt
cttcgtgcctacgctgtgaaggggttcggcaaggagcacgccaagtggaatcctaccagc
agcgtggcctttgaatacgaccctgacaacgctctccgccacactctcctgcccaagcct
gaggagtggccaaagagtgaatattctgccctggatgagaacacaccccaatcagaattt
gatccatccggcaaacccaacaagtattttttcaatgtggagagttctggttccctcaag
cctgagaacattatcctgatgggcattgcagcgctcaagaagaagctgtctgacctgcag
aaccaacttagcatggaggcccagagtgatgcgttggctatcaactaa
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