Portunus trituberculatus (swimming crab): 123502973
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Entry
123502973 CDS
T07853
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123502973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptru03021
]
123502973
Enzymes [BR:
ptru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123502973
Transcription machinery [BR:
ptru03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
123502973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Maf1
DUF3439
ANIS5_cation-bd
SSP160
Motif
Other DBs
NCBI-GeneID:
123502973
NCBI-ProteinID:
XP_045108209
LinkDB
All DBs
Position
2:4006589..4026771
Genome browser
AA seq
1406 aa
AA seq
DB search
MKEQYRETDVVRNITNIQFGVLSAQDMQQMSHAHVVSSELYTAPAITRQPAPHGVLDLRM
GTSQKDMACETCSKNLTDCTGHYGFLDLARPVFHVGYFKNTVHILQNICKTCSHVLLKVK
DKPGMCEQAKRITSYLQKKALYKRVNELCKKVSLCPNCGATNGVVKRLPPLKIVHERFRN
VKKGDPVLTEYFAQFDTALEYNKELESHLSSNVVEFLNPSQVLDLFEKIPYCDLPLLCMN
QQFSHPKDLILTRLLVXPNCIRPSVISELKSGTNEDDITVMLTEIIFLNNLINKRSAGKV
QSIQDSWEHLQLHVAFIINSEISVPLDLSMARKSTRGFVQRLKGKQGRFRGNLSGKRVDF
SSRTVISPDPNLRINEVGVPIEVAKQLTYPERITAHNLALMRQLVRNGPDRHPGAMFLEP
RTSPGLKKSLRYVNRERTAMELRHGDVVERHLMDGDIVLYNRQPSLHKMSIMSHRVRVLP
WRTFRFNECVCAPYNADFDGDEMNLHVPQTEEARAEALTLMAVTSNLITPRHGALIVGAT
QDFLTGSYLLTQKDVFFDREHTCHLISSILAGKEANYKIDLPPPAILKPQQLWTGKQVFS
AIIRPSKAFPVEVNLTARRKDYTRGEELCSNEAWVVMRNSQLLAGALDKSLLGSGSKKNL
FYVILKDYGKEHAADAMWRVARVSTLFLMNHGFSIGIGDVMPGAGLLARKRELLQDGYGK
CDEFISQLKEGTLHCQPGCSAEETLEQLILKELSTIRDKAGKACVMELHKTNAALIMAIS
GSKGSFINISQMIACVGQQAIGGKRVPNGFEDRALPHYERHSKIPAAKGFVSNSFFSGMT
PTEFIFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLYVAYDMTVRNSMQDIIQFKYG
GDGLDPSEMEGTTGPIDLERVLDHIRAKSPFPEEDPLTGAEILQLATKYLSEDAFKELSA
EFKAELKSFMERFSKRVDKIRSRLTSTTTTTTATTSTTTTTTKAPPRAPVEKHIERLTFT
QLIDFLNSCLDRYQAAVVEPGTAVGALCAQSIGEPGTQMTLKTFHFAGVAAMNITLGVPR
ILEIINASHSISTPIITAKLKEDSDPEKARQVKGRIEKTLLGEVCEYVEEVFLPDDCFLL
LKLAVDRIRLLKLEVDAYSIKYAICVSKLKVKDGDVRVESDTIITVRPSRTKSSAMYYQL
QHLRQHITKVIIKGLPSVNRAVINQSDTGPGGKQKYELLVEGDNLREVMATYSVDGTRCT
SNNTYEVFTCLGIEAARATIIHEITVTMETHGLSVDKRHVMLLADLMTCRGQVLGITRHG
LSKMKESVLMLASFEKTADHLFDAAYHGQSNPIKGVSDCIIMGKPMNIGTGVFKLVHHHH
RETRPPPRKLIFDHPEMHVPLSLSWS
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaacagtacagagagaccgatgtggtgcggaacatcaccaacatacaatttggt
gtcctctcagcccaggacatgcagcaaatgagtcatgcccatgtggtgtcctcagaactg
tacaccgcccccgccatcacccgccagcctgccccccacggcgttctggacctgcggatg
ggcactagccaaaaggacatggcttgtgagacgtgctccaagaatctgacagactgcaca
ggtcattatggcttccttgacctggcgcgacctgtcttccatgtcggctacttcaaaaac
actgttcacatcctccagaacatttgcaagacctgctcccatgtactactgaaggtgaag
gacaagccagggatgtgtgagcaggccaagcgtattacgtcctacctacagaagaaagcg
ctctacaaacgtgttaatgagctgtgcaagaaggtgtctctgtgtcccaactgtggtgcg
acaaacggggtggtcaaacgtctccctccgctgaaaattgtccatgagagatttcggaac
gtcaagaagggagatcctgttttaaccgagtactttgctcagtttgacacagctctggag
tacaacaaggagctggaatcccatctctcctctaatgtggtggagtttttgaacccaagc
caagtgttggatctatttgagaagatcccgtactgtgacctgccgctgctgtgtatgaac
cagcagttttctcaccctaaggacctcattctcacccggctgctggtgnccccaaactgc
atcaggccctccgtcatctcagagctcaagtctggaacgaacgaggacgacatcacagta
atgctgacggagataattttcctgaacaacctgatcaacaaacgcagcgctggtaaggtc
cagagcatccaggattcttgggaacaccttcagctccatgtggctttcatcatcaactcc
gagatttctgtgcctctcgacctcagcatggccaggaagtcgactcgtgggttcgtgcag
cggctgaagggcaaacaggggcgtttccgtggcaacctgtctggaaaaagggttgacttc
tccagcaggactgtcatttctcccgacccaaatctgcggatcaatgaggtaggcgttccc
attgaggtggccaagcagttgacttacccggagagaatcacagctcacaatttggcccta
atgcgtcagctggtgaggaatggccctgatcgacaccctggggcaatgttcctggagcca
aggacgtctccagggcttaaaaaatccctgagatatgtaaacagggaaagaacagccatg
gaactgaggcacggcgatgtggtggagagacacttaatggatggggacatagtgctatac
aatcgtcagccgtccctccacaagatgtccattatgtcccatcgtgtccgagtcctcccc
tggcgcacgtttcgcttcaatgagtgtgtgtgtgccccttacaacgctgacttcgatggt
gacgagatgaaccttcacgtgccgcagactgaggaggcgcgcgctgaggctctcactctc
atggcggtcacatcaaatctcatcacacctcgccacggagctctgatcgttggcgccaca
caagatttcctcactgggtcctatttactgactcaaaaggatgtgtttttcgaccgcgag
cacacttgtcacctcatttcctccattctggctgggaaggaggcaaactacaagattgac
ctgcccccgcctgccattctgaagccacagcagctctggacgggaaagcaagtgttcagt
gcaataatccgtcccagcaaggcattccccgttgaagtgaacctgactgcccgtcgcaaa
gactacacaagaggcgaggaactgtgctctaatgaagcgtgggtcgtcatgcggaactca
cagctcctggcgggggctctcgacaagtctctcctgggttcgggctcaaagaagaacctg
ttttatgtgatactgaaggattatgggaaggaacatgcagcagatgcgatgtggagagtg
gccagagtgtcgacgctcttcctcatgaatcatgggttctccatcggcattggagatgtc
atgcctggtgccggactgctggctaggaaacgagagctgctgcaggatgggtacggcaaa
tgtgacgagtttatatcacagctgaaggaaggaacactgcactgccagccaggatgcagc
gctgaggagaccctggagcagctaatccttaaagaactgagtaccattagggacaaggca
gggaaggcatgcgttatggagctccacaagaccaacgcagccctcatcatggccatttct
ggttccaaggggtcgtttattaatatctcacagatgattgcctgtgtgggtcagcaggct
attggcgggaagagagtgcctaatgggtttgaggatagagcattgccacattatgaaaga
cactcaaagatcccggcagctaaggggttcgtgagcaacagtttcttctccggcatgaca
cctacagaattcattttccacaccatggcgggcagggaggggctggtggacactgcagtt
aagacagcagagaccggctacatgcagaggcgacttgtcaagagcctggaggatctgtat
gttgcctatgatatgactgttcgtaattccatgcaagatattatacagttcaaatatggc
ggagacggcctggacccctctgaaatggaaggcacaacaggtcccatagacttagagaga
gtcctggaccatattcgagccaagagtcccttcccggaggaggaccctttgaccggtgct
gaaatcctgcagctggccaccaagtatctgtcggaggatgccttcaaggaactctccgcg
gaatttaaggccgagctcaagagttttatggagaggttttcaaagagggtggataagatc
cgctccagactgaccagcaccactaccaccaccaccgctaccaccagcaccaccaccacc
accaccaaggcaccacccagggcaccagtagagaagcacattgagagacttaccttcaca
cagctcatcgacttcctcaattcttgcctggaccgctaccaggctgctgtggtggagccg
ggcacagcggtgggtgccctgtgtgcccagagcatcggggaacctggcactcagatgaca
ctcaagacgtttcacttcgctggtgtggcggcaatgaatattaccctcggagtgccgcgc
attctggagatcatcaacgcatctcacagcatctcaacaccgatcatcactgctaagctt
aaagaggacagtgacccagagaaggcaaggcaggtgaagggaaggattgagaaaacactg
ttgggggaagtttgtgagtatgttgaagaggtgtttctgcctgatgactgcttcctcctc
ctcaaactggccgtggatcgcatcagactgttgaaattagaagtcgatgcttattcgatc
aagtacgctatctgtgtgtccaagctcaaggtgaaggacggtgatgtgcgggttgaatcg
gacaccatcatcaccgtgaggccttctcgcaccaagagctctgccatgtactaccagctg
caacacctccgccagcacatcaccaaggtcatcataaagggcctgccgtcggtcaaccgt
gccgtcatcaaccagagcgacactgggccaggaggcaagcagaaatatgaactgcttgta
gaaggagacaatttaagagaagtaatggcaacttacagtgttgacgggacacgctgtact
tccaacaatacatacgaagtgtttacctgcctgggcattgaagcagcaagggccacgatc
atccacgagatcacagtgaccatggagacgcacgggctgagtgtggataaacggcatgtg
atgttactggcggatttgatgacatgcaggggacaggttctgggcataactcgccatggc
ttgtccaagatgaaggagagtgtgttgatgctggcttcgtttgagaagacagccgaccac
ctgtttgacgcagcttaccatgggcagagcaaccccatcaagggagtgagtgactgcatc
atcatgggaaagccaatgaacatcggcactggggtgtttaagttggttcaccaccaccac
cgggagacgagacctcctccaaggaaactcatatttgatcacccagaaatgcatgtccct
ctctctctctcctggtcgtga
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integrated database retrieval system
