Portunus trituberculatus (swimming crab): 123518565
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Entry
123518565 CDS
T07853
Name
(RefSeq) LOW QUALITY PROTEIN: microtubule-associated protein futsch-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03020
RNA polymerase
ptru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123518565
09124 Replication and repair
03420 Nucleotide excision repair
123518565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptru03021
]
123518565
03400 DNA repair and recombination proteins [BR:
ptru03400
]
123518565
Enzymes [BR:
ptru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123518565
Transcription machinery [BR:
ptru03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123518565
DNA repair and recombination proteins [BR:
ptru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123518565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-MYND
Motif
Other DBs
NCBI-GeneID:
123518565
NCBI-ProteinID:
XP_045135354
LinkDB
All DBs
Position
44:complement(12183283..12280542)
Genome browser
AA seq
2914 aa
AA seq
DB search
MAAPQQHPLTNTSCSFSSPAVXSPAAGSYGSGKTPFCGDLHGQVSVASDCNVQSLVCSSA
TVSPQPILTNSASRKTKPCSLCGTAALRSQSSLIPNSPVSPQEQPVVLLHRLEDGLPEGD
VDSLRAFGTIRLLPVHCGKVEGVTDDSKHKCDRKFQSVTSHAMAPGNLAYRSFKRGNTKK
RLELPSVSQGYGDRNKSLTNDILRKFKASDSQHNLSEKKIKSNTNSDSGGTSHRVKNSSE
AHVNENSVGNILISGEETLGERLKTLSSQQNHPQYSTVSTVSSVSQSLHRVSSHQHQTLS
PQADTLERSSTSRSPLSSLNNLLSPQTSTSSTVNSHSHDSTSLAHSTQDSIHQRSVTPDT
QMSVVCSPVLPLTTAAISSPSQNIDSPSTISPPESPPSPPSPFSPAFMGSPSTCDHDNLH
SSCSADVQPSSSPYSPCTLPSLPASPTSLPSSSPPSPTHSVDSPPVSPATCENSDSQVPF
PETLGGDPLAENTDSEVQLDTLLKSKVDFELGETRVSEVVSQYHLNRTCQKEVAHVPSAS
ETEPALSAQIYIPEDTSTVSQNSETEAHADLYQEASTDYECGDRKNSLEEVEHLKPDVVK
TSLNSESNNENKNKEAEKNCSDSKNSLMKLVLKVKHPANQQLPVGPEKKEYNKENGIPKI
VLTWKGNGPNKEYSCSNRLRNESESCSGESVYNKKHKSKRNKRQKPKDREKMKRVIKVGK
HKRHVELFGEDSNDSCDIIHDNIDTSEGGHSTTASIDEQRLRPFFTPCATEDVPSFPDER
NLAPTLSLGESPSHCAKFEESAETADTFNLSEQSLPHSLPSDVPDVNTDIKDMTKSSIED
TEGTTENQPECTENYTHETLNLTAEVPETRGDEPSCMELQPEGKETSQASPGTRHSGEID
QQDKQSEGLTLRSRRSRHVKNTESGRNSDTCLWVSFGVNAPMPLPATDLPSLEPVFTSRE
KTKLRESEINDSKEHISSNQPKVEVKKPFSKATHKERKEKEKTETQPDTTKQFTEHDYES
KAKFLIKHIDSKTVVSHSHRKVHSTSSHDDNYGAHGNGRSYGVSTHHRSRHSHKRQRKSD
DDREEAVTKEISSRQQNSLDGPERDDNGSQVNSIKSDKEKSATSHFTTDYGPDDVQMKTE
EISSAKELCPLLNPSSSVDDSKEDHKKSPNNISSHEENEVNVKPEKLVNLKTEETSDDQY
YRPKKMRKAFNNRITTNHHNESASIDQKTTKHQTDEKTVTDQPEDCNAQVSLKFSSSEVV
TTTYSSGMHTVESESSMVECHTAEVKTDVPWRPHEEITKPDVLSRSPNNSETSNEQRKRK
HPSPTPQGQDLVTRVGVESVDEQSKQATEGRKEEASDKSVSFKKDTSPNSEDNENKEASK
KEKEKRKKPRKEKRKDGSRPGSRCAVLQEAQFRREVEHEGRGRRLAQEIKGFNWLEQKIK
NNSLLSSRAVPSTPTTSSSGKELESPSKSVSSTPTAPSSQFTFSSKDEEQARKNSFSGSS
SNIGFKRHLQTAVPPLIPSSKVTALPKRRPSLGTTTPPCSAPPALCSTTTVPSMTVPGTL
YTCEPTLYRSGHGRVPPPLEKSSTSLEHAEGDKATLYSSTSSTKATLYGVKDNSFEALYD
TVNVNAVKYYGSVASGDIDPQYNITTTPPICFYGSTKYQEPDLHPDKTPPTGSHAKSSII
STPQDSGGMTDHQADKICSPKPDTCSARNSDWSAQQGSSPNSQHSGCSAGPHSPQRFSHK
QTLLRRAFQEMMKSDSNNSSTEQTKEKESVIQSNPTKTEMNMADESKSKEMETPGSTTAQ
SSSERTSSVDIKSIKSQCPDITPSLSLSKWPSEPTESHIFSYSPKSIATPINSEKDVIDP
VCTENKISTSSTNIQEGAENVASKIDLNKKIVMTENNPNIKENDSDKQTSLGKINNDKNM
KIPENSKDLQSDVIDCIGSESGDIDMKVLKEEICYKGDGKSQEDAEVQPRLLLSVLYKEL
MKTRQEVEKLRKVQELMLTEKEEKKEDGGEQSSETKIECEKADENSHSNERNSEKRKDHE
SSDVELKIDDDDECHFHESKRSKISIRSDLLPREDNVDLDTTSHNTSVSQKIISHSHQIS
SATLKNLTQVQSNLEISMTSLKGSSVPETSHASQVNPAMPAVSPGLSSSIAISPNTTTPL
LRGHSSASPGVSSPGIPRSSPGIPRPSPPITRTSPGITKSNSGSIIVSPGGSISPAMPSS
SPGIARNSPGVPQNSPGVLRMSPGLPRIHCGIPRISPGGPLVSPVALVVSPATSVISPGA
PMASPGAPMASPGVPMASPGAPMASPGAPMTSPGRPMASPGRPMASPGRPIASPGVSVVS
PGSSRNGLGLIRNDSEVTIVNPGILHMSPSSSQGNVFSTPTNPSSAEDLHMSYSDPAVTT
AQPKVTTIQTVTSPVVPVPRFPQIPITSTAVPVISPTGGKRNPITSKIDQAATTSLKKTT
TPLTNMSPTKLRSVFGISNSEVELMPVSVEPKQTLHEPQPRTFLNLIEDQHHQTTEMPLL
LSAVQGVHQESGSKNVESSSSHGAVPFHSLAGHEDLKRISKAHQYPGEIKRHALSTSDLP
DHASSACKQPPPLKPATTLLRRHSDNMDIHSAMHHHAMYGGTRKNSTSSLHSSAAVAEHK
NANAAHPFNHPQYSPTQYPLPNPRGRRNTDTNSTERNRGYQQAVSMGMQHQFPHLPSGSS
VMRSLGPDKATIFPITPTMPAAIRPFRPSALPPATRAQLEQLQNENFYRTNFSFFEKIRE
KFAQPCDNGISAMDRLQASTANVEKPMQPQTFAPRVLVRESIPEAHTPTTSYTTMHFPNQ
NQPAHNVMPSHQNHFSTNMHSGPSLQHLAQARLHNQATSSMQRVNSSSLRSGEKLCFHCS
QQARFICSGCKKAWYCSEQCQREHWSVHSSACVL
NT seq
8745 nt
NT seq
+upstream
nt +downstream
nt
atggcagccccacaacaacatccactgactaacacctcgtgctcattctcctctcctgcc
gtcntttctcccgctgctggaagctatggtagtggaaaaacaccattctgtggcgacttg
catggtcaggtgagtgtcgccagcgattgcaacgtccaaagtctcgtgtgctccagtgca
acagtctctccacaacctatcctcaccaattccgcgtcgcgcaagactaaaccttgctct
ctgtgcggcacagctgctctgcgctcccagtcatctctgatccctaattcaccagtcagt
ccccaggaacagccagtggtactccttcatcggttagaggacggactaccagagggtgat
gttgacagtctccgtgcctttgggactattcgactcttgcctgttcattgtggtaaggtc
gaaggcgttacagatgacagtaaacataaatgtgacagaaaatttcaaagtgttacgagc
catgcaatggctccaggaaatttggcatacagatcatttaaaagagggaatactaaaaaa
cgattagaattaccgagcgtgagtcaaggttacggtgaccgcaacaaatcactaaccaac
gatattctacgtaagttcaaagctagtgacagtcaacacaatctcagtgaaaagaaaatc
aaaagcaatactaattcagacagtggtggaaccagtcaccgtgtaaagaacagcagtgaa
gctcatgtgaatgaaaacagtgtagggaacattttaatctctggggaggagacactcggc
gaacgtttaaagacactttcctcccagcaaaaccatcctcagtattcgactgtttccacc
gttagctcagtgtctcagtcccttcaccgtgtatccagtcatcagcaccagacgctctca
cctcaagcagatactttagagcgttcttcaacaagcaggtctcctctttcatccctaaat
aatctattatcacctcaaacaagcacatcgtctactgttaatagtcactcgcacgacagt
acctctctggctcacagcacacaggactccattcatcaacgctctgtaacgcctgacaca
caaatgtctgtggtgtgttctcctgtgctgcccctgacgactgcagcaatctcgtcccca
tcgcaaaacattgattcaccatctaccatctctccgccggaatcccctccatcgccacct
tccccattctcaccagcctttatgggttccccttcgacgtgtgatcatgacaatctgcat
tcatcttgctcagctgacgtacagccgtcttcctctccatactccccatgcactttacca
tctttaccagcttccccaacatccttgccttcgtcatcccctccttccccaacgcattcc
gtagattcccctcctgtatcccctgccacctgtgaaaacagtgacagtcaagtgcccttc
ccagagacacttgggggtgatccacttgcagaaaacactgattcagaggttcagttggac
acgcttcttaaatcaaaagttgattttgaactcggtgagaccagagttagtgaggttgtg
tctcagtatcatctgaatcgaacttgccagaaagaggttgctcacgtaccgtcagcctct
gagacggaaccagcactctccgcccaaatatacataccagaagacaccagtactgtttca
caaaacagcgagaccgaagctcatgctgacctgtatcaagaggcctcaactgactatgag
tgtggagaccggaagaatagtctggaagaagtggaacatttgaagccagacgttgtgaaa
acttctttaaacagtgaaagtaacaatgaaaataagaataaagaagcagagaaaaattgc
agtgactctaagaattcgttaatgaagttggttttgaaagtgaaacatcctgcaaatcag
caacttcctgtggggcctgaaaaaaaggagtacaataaagaaaatgggattccaaagatt
gttctcacttggaagggaaatggacccaataaagagtattcgtgctcaaataggttaaga
aatgagagtgaaagttgctctggtgaaagtgtgtataataagaagcacaaatcaaagagg
aataaaagacaaaagccaaaagacagggaaaagatgaaaagggtgataaaagttgggaaa
cacaaaagacacgtcgaactctttggtgaggacagtaacgactcctgtgatataattcat
gataacattgatacaagcgaaggtggacattcaacaactgcttccattgatgagcaaaga
ctacggccatttttcacaccttgcgctacagaggacgttccgtcattccctgatgaaagg
aacttggctccaacactctcactaggggagtcgccttcacattgtgccaaatttgaagag
agtgcagagactgctgatacttttaatctttctgaacagtcgttgccacattcattgcca
tctgacgtccctgacgtcaacacagacatcaaggacatgacaaagtcgtcaatcgaggac
actgaaggaacaacagaaaaccagcctgaatgtactgaaaattatactcatgaaaccttg
aatctcacagccgaagtaccagaaactcgtggtgatgaaccttcttgcatggagttacaa
ccagaggggaaagagacctcacaagcatcgccaggtaccaggcactctggtgagatcgac
cagcaggataagcaatctgaaggtctgaccttgagaagccgaagaagcagacatgttaaa
aatacagagtcaggcaggaactctgacacttgcctgtgggtgagttttggtgtgaatgcc
ccgatgccactgccagcgactgacctgcccagtcttgaacctgtattcacatctagagag
aaaacgaaattgagggaaagtgagattaacgacagtaaagagcatatatcatccaatcaa
ccaaaggtcgaggttaagaaacctttttcaaaggcaacacacaaggaaagaaaggaaaaa
gagaagacagagacacaacccgataccaccaagcaattcacagaacatgattatgaatcg
aaagccaaatttctcataaaacacattgacagtaaaacagttgtctctcacagtcaccgt
aaagttcactccacttccagtcatgatgacaactatggtgcacatggcaatggacgcagc
tacggtgtctcgacacatcatcgctctcgacactcgcataaaagacaacgtaaatctgat
gatgaccgagaagaggccgtcacaaaggaaataagttcccgccagcaaaactcactagat
ggtcctgagagagatgataatggaagtcaagtaaatagtattaaaagtgataaagaaaaa
tcagcgacttcacatttcactactgattatggtccagatgatgttcaaatgaagactgaa
gagatatctagcgccaaagaattatgtccattgcttaacccttcatcaagtgttgatgat
agtaaagaagaccataaaaagtcaccaaacaacatctcctcacatgaagaaaatgaagta
aacgttaaaccagaaaaactagtgaacttgaagaccgaagaaacttctgatgaccaatat
taccgacccaagaaaatgagaaaagccttcaataatagaattactacaaatcaccataac
gaaagcgcatccattgatcaaaagacaaccaaacatcagaccgacgaaaagacagttact
gatcaaccagaagactgcaacgctcaggtttctctaaagttttcatcttctgaagtagtc
actactacttactcctcaggaatgcatacagtagaatcagaatcgtctatggttgagtgt
cacaccgcagaagttaaaactgatgtaccctggagaccacacgaagaaataacaaaaccg
gatgtgctttccagaagtccaaataacagtgaaacttctaacgaacagagaaaacgcaag
cacccgtcccctacgcctcagggacaggacctcgtcaccagagtaggcgtggaatccgta
gatgagcaatccaaacaggctaccgaaggaaggaaagaagaagcctcagacaagtcagtg
agcttcaaaaaggacacctctccgaatagcgaggataacgaaaataaagaagcttcaaag
aaagaaaaggaaaaacggaaaaagccacgcaaggagaaacgaaaagacgggtcacgtccg
gggagtcggtgcgccgtgctccaggaggcccagttccgacgggaggtggagcacgaggga
cgggggcgtcgcttggcacaagagatcaaaggcttcaattggctcgagcaaaagatcaaa
aacaactctttgctctcatcccgcgctgttccctccacaccaacaaccagttcgtcaggc
aaggagctcgagtctccctccaagagtgtctcatccactcccaccgctccctcatctcaa
ttcactttcagcagcaaagacgaagaacaagccaggaagaattcgttcagtggaagcagt
agcaacattggatttaaaagacatcttcagacagcagtacctcccctgataccttcatca
aaagtcacagcccttcctaagcgacggccatccttgggcaccaccacaccaccatgttca
gctccaccagctctctgtagtactacaactgtacctagcatgactgttccaggtacttta
tatacctgtgaaccaactttgtatagatctgggcatggaagagttccaccacctctggaa
aaaagtagtacaagtcttgaacatgctgaaggagataaggcaactctgtacagtagtacc
tcttctacaaaagcaactctgtatggagtgaaggataatagttttgaagcattatatgat
actgtcaatgtcaatgctgtgaaatattatggtagtgtagcttctggtgatattgatcct
cagtacaatattactactactccacccatctgcttctatggctcaacaaagtaccaggag
cctgaccttcatcctgacaaaactccacctactggttctcatgcaaagtcttcaataatt
tcaacaccacaggactcaggtggcatgacagatcaccaagcagacaagatatgttcaccc
aagcctgatacatgttcagctaggaattcagattggtctgctcagcaagggtcaagtcca
aacagccagcattctggatgctcagctggtcctcacagtcctcaacgattttctcacaag
caaacactcctcagacgggcattccaggagatgatgaaaagtgattccaacaattcatcc
acagagcaaacaaaggaaaaagaaagtgtgatacaaagtaaccctacaaagactgaaatg
aacatggcagatgaatcaaaaagtaaagaaatggaaacaccaggctccaccactgctcag
tcatcatcagaaagaacatcatctgtagatattaaaagtataaaatctcagtgtcctgat
attactccatctctatcactaagtaagtggccatcagaaccaactgagagtcacatcttt
tcatattctccaaagtcaatagcaacaccaattaattcagagaaagatgtgattgatcca
gtttgtactgaaaacaaaatatcaacttcttcaacaaacatacaagaaggtgcagaaaat
gttgccagtaagatagatctcaataaaaaaatagtgatgacagaaaataatccaaacatt
aaagaaaatgacagtgataagcagacttcattgggaaaaatcaataatgataagaatatg
aaaattccagaaaattctaaagatctgcaaagtgatgttattgactgcatagggagtgaa
tctggtgatattgatatgaaagtcttaaaagaagagatttgttataaaggtgatggcaaa
agtcaggaggatgctgaagtacagccaaggttgcttctttctgtactatataaagaacta
atgaaaacacgacaggaagtagaaaaattgcgaaaagtacaagagttgatgctgacagaa
aaagaagaaaagaaggaagatggaggtgaacagagcagtgagaccaagatagagtgtgag
aaagcagatgaaaattcacatagtaatgaaagaaattcagaaaagagaaaggaccatgaa
agcagtgatgtagaattaaaaattgatgatgatgatgaatgtcacttccatgagagtaaa
agatcaaaaattagtatacgcagtgaccttttgccaagagaagacaatgttgatcttgat
actacctcccataatacttcagtttcacaaaaaatcatctctcattcacaccaaatctct
tcagccacactcaaaaacctaactcaggttcagtccaatttggaaatttctatgacttct
ttaaagggttcatctgtacctgagactagtcatgcatcacaagtaaatcctgccatgcca
gctgttagtcctggcttatcaagtagtattgcaatctcacctaatacaaccactccccta
cttagaggacactcaagtgcaagtccaggagtgtcaagtccaggaataccaaggtctagc
ccagggataccaagacctagtcctcctattacaagaacaagtcctggaataacaaaatct
aatagtggaagcatcattgtcagtccaggaggttcgattagtcctgcaatgccaagtagc
agtcctggaatagcaaggaatagtccaggagttccacaaaatagtcctggagtactaaga
atgagtccaggacttccaaggatacattgtgggataccaaggattagtcctgggggacct
ttggttagtcctgtggcactagtagtcagtcctgcaacgtcagtaattagtcctggagca
ccaatggccagtcctggggcaccaatggccagtcctggggtaccaatggccagtcctgga
gcacctatggccagtcctggagcaccaatgaccagtcctgggagaccaatggccagtcct
gggagaccaatggccagtcctgggagaccaatagccagtcctggggtatcagtggtcagt
cctggttcgtcaagaaatggcctaggattaataagaaatgactcagaagtaactattgtc
aatcctggaatacttcatatgagccctagttcaagtcaagggaatgtgttcagtacacca
acaaacccatcatcagcagaagaccttcatatgtcttatagtgatccagctgttaccact
gctcagccaaaggtgacaactatacaaactgttactagccctgtagtaccagttcccaga
tttcctcagattcctatcacaagtacagcagttcctgttattagtccaactggagggaaa
agaaatccaatcacttcaaaaatcgatcaagcagcaactacatcattgaaaaagacaact
actcccctaacaaacatgagtccaaccaagttacgctctgtattcggaatatccaattct
gaggtagagctcatgcctgtatcagttgaaccaaagcagactcttcatgaacctcagcct
cggacattcttaaacctgattgaagaccagcatcatcaaacaacagaaatgcctcttctc
ctcagtgctgtacagggagttcaccaagagagtggctccaaaaatgttgagtcgtcatct
agtcatggagcagtgcctttccacagtcttgcaggtcatgaggatcttaagaggataagt
aaagcccaccagtatccaggggaaattaaacgacatgctctttccacttctgatctccca
gaccatgcatcatctgcctgcaagcaacctcctccactcaagccagcaaccaccttactc
agaagacattcagataatatggacattcattcagcgatgcaccatcatgctatgtatggt
ggcacacgcaaaaactccacaagttctcttcattcttctgctgcagtagcagaacataaa
aatgcaaatgcagcacatccatttaatcatcctcagtacagccctacacaatatccctta
ccaaatccaagaggaagaagaaatactgatacaaactctacagaaaggaatcgaggatat
cagcaggctgtgtccatgggaatgcaacaccagtttccacatttaccctctggatcatca
gtaatgagaagccttggaccagacaaagctactatttttcctataacaccaactatgcct
gcagcaattcgtcccttcaggccctcagctctacctcctgccactcgagctcagctagaa
cagttgcagaatgaaaacttttatcgaacaaatttctcattttttgagaaaatcagagaa
aaatttgctcaaccttgtgacaatggcatcagtgccatggatagattacaggcatctaca
gcaaatgtagaaaagcccatgcaaccacaaacctttgcacctcgagttctagttcgagaa
tctattccagaagctcatacaccaacaacctcatacacaacaatgcattttccaaatcaa
aaccaaccagcacataatgttatgcccagccaccagaatcacttctcaactaacatgcat
tctggtccaagtcttcagcacttagctcaagctagacttcacaatcaagcaacttccagc
atgcaacgtgttaacagttcaagtttgagaagtggagagaagttgtgtttccactgttct
caacaagctcgattcatatgctctggatgcaagaaagcttggtactgctcagaacaatgt
cagcgtgaacattggagcgtccatagttctgcttgtgttttatga
DBGET
integrated database retrieval system
