Pseudoalteromonas tunicata: PTUN_b0800
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Entry
PTUN_b0800 CDS
T05187
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ptu
Pseudoalteromonas tunicata
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptu03009
]
PTUN_b0800 (rimO)
Enzymes [BR:
ptu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PTUN_b0800 (rimO)
Ribosome biogenesis [BR:
ptu03009
]
Prokaryotic type
ribosomal protein modification factors
PTUN_b0800 (rimO)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ATC97135
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All DBs
Position
II:831934..833337
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AA seq
467 aa
AA seq
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MTVETFNPKQTTTLDTPAKTLASQAPTAKGTGSKVGFVSLGCPKNLVDSERILTQLRTEG
YEVVSSYHDSDVVIVNTCGFIDSAVQESLDTIGEALKENGKVIVTGCLGAREDEIREVHP
NVLGITGPHAYENVMEHVHEFAPKPVLNPFMSLIPDQGVKLTPKHYAYLKISEGCNHRCT
FCIIPSMRGDLVSRPIGDVLQEAERLKQAGVKELLVISQDTSAYGVDVKSKTGFWNGMPV
KTDMLNLCQALNKLGIWVRLHYVYPYPHVDDIIPLMAEGKLLPYLDIPFQHASPRILKMM
KRPGQAERTLDRIKKWRQLCPELVIRSTFIVGFPGETEEDFQILLDWLEEAQLDRVGCFK
YSPIEGAKANELAEPVPEEIMQDRFERFMLKQQAISKNRLALRIGQVMEVLVDEVDEEGA
IGRTFADAPEIDGVIYLNGETDLKPGDVVKVLVEHSDEYDLWGSVQR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacagtagaaaccttcaatccaaaacaaaccaccacattagataccccagctaaaacg
ctagccagccaagcgccaacagcaaaaggtactggttctaaggtcggttttgtaagctta
ggttgtcctaaaaatctcgttgattctgaacgaattttaacgcaacttcgaacagaaggt
tacgaagtcgtcagcagctaccatgattcagatgtggtgattgttaatacctgtggcttt
atcgacagtgcagtacaagagtctttagataccattggcgaagcactaaaagaaaatggc
aaggttattgtgactggctgtttaggtgcgcgcgaagatgaaattcgcgaagtgcatcca
aatgtgcttggcatcaccggtccacatgcctatgaaaacgtgatggagcatgttcatgag
ttcgcaccaaaacctgtgctaaacccattcatgagccttattcccgaccaaggtgtaaaa
ctgactccaaaacattatgcttatttaaaaatatctgaaggctgtaatcacagatgtact
ttttgtatcattccatcaatgcgtggtgatttagtctcgcgtccaataggtgatgtttta
caagaagctgagcgtttaaaacaagctggcgtaaaagaacttttagtgatcagccaagat
acaagtgcatatggcgttgatgttaagagtaaaactggtttttggaatggaatgccagtt
aaaacagatatgcttaacttgtgccaggcactaaataaactaggtatttgggtgcgtctg
cattatgtgtatccgtacccacatgttgatgacatcattccactaatggctgaaggtaag
ttactcccttatttagatattccttttcagcatgcaagccctcgcatcttaaaaatgatg
aagcgcccaggtcaagccgaacgtactttagatcgtattaaaaaatggcgtcaattatgc
ccagagctggtcattcgctctacctttattgttggtttccctggtgaaacagaagaagac
ttccaaatattactcgattggttagaagaagcgcaattagaccgcgtaggctgttttaaa
tactcacctattgaaggcgctaaagcgaatgaattagcagagcctgtgcctgaagaaata
atgcaagaccgttttgagcgtttcatgttaaaacaacaagcgatcagtaaaaaccgttta
gcactgcgtattggtcaagtcatggaagtattagttgatgaagtggacgaagaaggtgcc
attggccgtacgtttgcagatgcccctgaaattgatggtgtgatctacttaaacggtgaa
actgatctaaaaccaggtgatgttgttaaagtgctggttgaacattctgatgaatatgat
ttatggggttctgttcaacgctag
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