Pseudomonas tohonis: TUM18999_20400
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Entry
TUM18999_20400 CDS
T07887
Symbol
ldcA
Name
(GenBank) lysine-specific pyridoxal 5'-phosphate-dependent carboxylase LdcA
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw00330
Arginine and proline metabolism
ptw01100
Metabolic pathways
ptw01110
Biosynthesis of secondary metabolites
Module
ptw_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
TUM18999_20400 (ldcA)
Enzymes [BR:
ptw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
TUM18999_20400 (ldcA)
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Colicin-DNase
Motif
Other DBs
NCBI-ProteinID:
BCG23849
UniProt:
A0A6J4E3B2
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All DBs
Position
2233055..2235310
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AA seq
751 aa
AA seq
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MYKDLKFPILIVHRDIKADTVAGDRVRGIARELEQDGFAILSTASSAEGRIVASTHHGLA
CILVAAEGAGENQRLLQDVVELIRVARVRAPQLPIFALGEQVTIENAPAEAMADLNQLRG
LLYLFEDTVPFLARQVARAARNYLEGLLPPFFRALVEHTAQSNYSWHTPGHGGGVAYRKS
PVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS
TANKIVWHSMVARDDLVLVDRNCHKSILHSIIMTGAIPLYLCPERNELGIIGPIPLSEFS
RESIQAKIDASPLARGRAPKVKLAVVTNSTYDGLCYNAELIKQALGDVVEVLHFDEAWYA
YAAFHEFYDGRYGMGTRRTDDGPLVFTTHSTHKLLAAFSQASMIHVQDGGSRQLDRDRFN
EAFMMHISTSPQYGIIASLDVASAMMEGPAGRSLIQETFDEAVSFRRALANVWQTLDAQD
WWFDIWEPPQVEGAESVATRDWLLQPGADWHGFGDVADDYVLLDPIKVTLVTPGLSADGK
LGEQGIPAAVVGKFLWERGLVVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRSYDAN
APLTSALPSVARAGGARYQGLGLRDLCDELHACYRDNATARAMRRMYTALPELAIKPSEA
YDKLVRGEVEAVPIEQLQGRIAAVMLVPYPPGIPLIMPGERFTAQTRSIIDYLAFARTFD
NCFPGFDSDVHGLQHDDSPTGRCYTVDCIRE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaagacctgaagttccccatcctcatcgttcatcgcgacatcaaggccgacacg
gtcgccggtgatcgcgtgcgcggcatcgcccgcgagctggagcaggacggcttcgccatc
ctctccaccgccagttccgccgaagggcgcatcgtcgcctccacccaccatggcctggcc
tgcatcctcgtcgccgccgaaggcgcgggggagaaccagcggctgctgcaggacgtggtc
gagctgatccgcgtggcccgggtgcgcgcaccgcaactgccgatcttcgccctgggcgag
caggtcaccatcgagaatgccccggccgaagccatggccgacctcaaccagttgcggggc
ctgctctacctcttcgaagacaccgtgcccttcctcgcccggcaggtcgcccgcgccgca
cgcaactacctcgaaggcctgctgccgccgttcttccgtgccctggtggagcacaccgcg
caatccaactattcctggcacacgcccggccacggtggtggcgtcgcctaccgcaagagc
ccggtggggcaggcgttccaccagttcttcggcgagaacaccctgcgttcggatctctcc
gtctcggtgcccgaactggggtcgctgctggaccacaccggcccgctcgccgaggccgag
gcccgcgccgcgcgcaacttcggcgccgaccacaccttcttcgtgatcaacggcacctcg
acggcgaacaagatcgtctggcactccatggtcgcccgcgacgacctggtgctggtggac
cgcaactgccacaagtccatcctccactcgatcatcatgaccggcgccatcccgctgtac
ctctgcccggagcgcaacgagctgggcatcatcgggcccatcccgctcagcgagttcagc
cgcgaatccatccaggccaagatcgacgccagccccctggcccggggtcgggcgccgaag
gtgaagctggcggtggtgaccaactccacctacgacggcctctgctacaacgccgaactg
atcaagcaggcgctgggcgatgtagtcgaggtgctgcatttcgacgaggcctggtacgcc
tacgcggccttccacgagttctacgacgggcgctacggcatgggcacccggcgcaccgac
gacggcccgctggtgttcaccacccattccacccacaagctgctggcggccttcagccag
gcctcgatgatccacgtgcaggacggcggcagtcgccagctggaccgtgaccgcttcaac
gaggcgttcatgatgcacatctccacctcgccccagtacggcatcatcgcctcgctcgac
gtggcctcggcgatgatggaaggccccgccgggcgctcgctgatccaggagaccttcgac
gaagcggtgagcttccgccgcgccctggccaacgtctggcagaccctcgatgcccaggac
tggtggttcgatatctgggaaccgccgcaggtggagggcgccgagtcggtggcgacccgc
gactggttgctgcagccgggcgccgactggcacggcttcggcgacgtggccgacgactac
gtgctgctcgacccgatcaaggtcaccctggtcacccccggcctcagcgccgacggcaag
ctgggcgagcaggggattcccgccgccgtggtgggcaagttcctctgggagcgcgggctg
gtggtggagaagaccgggctctactccttcctcgtgctgttctccatgggcatcaccaag
ggcaaatggagcacgctgctcaccgagctgctggagttcaagcgctcctacgacgccaac
gccccgctgaccagcgcgctgccctcggtggcccgtgccggcggtgcccgctaccagggg
ctggggctgcgcgacctgtgcgacgaactgcacgcctgctaccgcgacaacgctaccgcc
cgcgccatgcgacgcatgtacaccgcgctgccggagctggcgatcaagccctcggaggcc
tacgacaagctggtgcgcggcgaggtcgaggcggtgcccatcgagcagctccaggggcgc
atcgccgcggtcatgctggtgccgtacccgccgggcatcccgctgatcatgccgggcgag
cgtttcaccgcgcagacccgctcgatcatcgactacctggccttcgcccggaccttcgac
aactgcttccccggcttcgattccgatgtccacggcctgcagcacgacgacagccccacg
gggcgctgctataccgttgactgcattagggaatga
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