Pandoraea thiooxydans: ABW99_00805
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Entry
ABW99_00805 CDS
T03947
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
ptx
Pandoraea thiooxydans
Pathway
ptx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABW99_00805
Enzymes [BR:
ptx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
ABW99_00805
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GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
GcpE
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AKJ66984
UniProt:
A0A0G3ELY4
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All DBs
Position
968083..970083
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AA seq
666 aa
AA seq
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MDNDLDYSILYEYFGTSSPYWRLAGDSNALSLEAQRGSTNLSIALSAAQAGEVRGMTGVT
SHRVLDVSIVGEPLRLHLVGRKVNPTQWAGTASAYDDTVSVARDLVHGLSFAEQVVSEVN
SLVVILDRHGRVQRFNRLCEEVTGMREEDVIGKSAFELFMSAEQGQASSRNISSFYNSGE
PYEVERYINTVNGPRLFLFRNKFVQSGSGVDEQFLICSGTDITEERNAQRRLSELANTDG
LTGLPNRNAIHEKIKTAIAAQAGESNRVGILFLDLDNFKKVNDHYGHVVGDRLIRDVASL
IQSCLGEGDTLARLGGDEFVVVIEKSTIELLEATAQRILDRLRTPFHLGLMEIYTGCSIG
IALYPDHGDGLESLIRSADTAMYVAKDAGKRTYRVFSPDMNKKVAEYMWLDTNLRKALDE
QQLVLYYQPAVSLATGVVHGVEALIRWKSPERGLIPPTEFIRYAEESGLIGPLGRWVMQA
AANQAMRWKAKGLNIRISINVSARQLCDTDIVNHFSHALDVAGLQPCLLDLELTESCFIE
DEATAIGLIKRFRQLGAKVHLDDFGTGYSSLSQLARIPLDVIKLDRSFVSGIDTNTKSQA
LVRSMAAIAQELRFAVIAEGVETRAEADFLKQVGVDYAQGFLYGKPMTAEEFEVWLSEQR
RLRLIA
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggataacgatctagattactcaatactgtacgaatatttcggtaccagtagcccgtat
tggcgcctggccggcgacagtaacgcgctgtcgctcgaagcacagcgcggctcgaccaat
ctgagcatcgcgctgagcgcggcgcaagcgggcgaggttcggggcatgacgggcgtgacg
tctcaccgggtgctggatgtcagtatcgtcggcgagccgttgcgacttcacctggtcggc
aggaaggtcaatcccacccaatgggcgggcactgcctcagcttacgacgacacggtttcg
gtcgcgcgcgatttggtccacgggctgtctttcgccgagcaggtggtctcggaggtcaac
tcgctggtggtgattctggatcggcacggtcgggtgcagcgctttaaccggttgtgcgag
gaagtcaccggcatgcgcgaggaagacgtgatcggcaagagtgccttcgaactgttcatg
tcggcggagcagggacaggcctcgagtcgcaatatctccagcttttacaattctggcgag
ccatacgaagtcgagcggtatatcaataccgtcaatggccccaggctctttttattccgc
aacaaattcgtccagagcggcagcggcgtcgacgagcagttcctgatttgctcgggtacc
gatattaccgaggagcgcaacgcgcagaggcgcctgtcggaactggccaataccgatggc
ctgacgggcctgccgaaccgcaacgccatccatgaaaagatcaagacggcaatcgccgcc
caggccggcgagagcaaccgcgttggcatcctgttcctcgacctggacaatttcaagaag
gtcaacgatcactacggccatgtcgtcggcgaccgtttgattcgcgacgtcgcaagcctg
atccagagctgcctcggggaaggcgatacgctggcgcgcctgggcggtgacgagttcgtg
gtggtgatcgaaaaatccacgatcgaactgctcgaggcgacagcccaacgcattctggat
cgtctgcgcacgccgttccacctcgggttgatggaaatctacaccggctgctcgatcggc
atcgcgctctacccggatcatggcgacggtctcgaaagcctgattcgcagcgccgacacg
gcgatgtatgtcgccaaggatgccggcaagcgcacctatcgggtgttctcgcccgatatg
aacaaaaaggtggccgagtacatgtggctcgacaccaacctgcgcaaggcgctcgacgag
cagcagttggtgctgtattaccagcccgcggtatcgcttgccactggcgtggtgcatggc
gtcgaggccctgattcgctggaagtcccccgagcgcggcctgattccgccgaccgaattc
atccgctacgcggaagaatcgggcttgatcggaccgctcgggcgctgggtgatgcaagcg
gcggcgaaccaggccatgcgctggaaggccaaggggctcaatatccggatttcgatcaac
gtctcggcccgccagttgtgcgacacggatatcgtgaatcacttcagccatgccctcgat
gtcgccggcctgcagccttgtctgctcgacctcgaattgaccgagagctgcttcatcgaa
gacgaagccacggcgatcgggctgatcaagcgattccgccaactcggcgccaaggtgcat
ctggacgacttcggcaccggttactcgtcgctgtcgcaactggcgcgcattccgctggac
gtgatcaagctggatcgcagtttcgtctccggaatcgacaccaacaccaaatctcaggcg
ctggtgcgctcgatggcggcgattgcccaggagttgcgtttcgcggtgattgcagaggga
gtcgagactcgcgctgaagccgattttctcaagcaggtcggggtcgattatgcgcagggg
ttcctatacggaaaaccgatgacagcagaggagttcgaagtttggctgtcggagcaacga
cggctccgcttgatcgcctga
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