Pseudomonas toyotomiensis: JWV26_16625
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Entry
JWV26_16625 CDS
T07285
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
pty
Pseudomonas toyotomiensis
Pathway
pty00053
Ascorbate and aldarate metabolism
pty01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
JWV26_16625 (garD)
Enzymes [BR:
pty01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
JWV26_16625 (garD)
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Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
QSL91383
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Position
3624699..3626255
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AA seq
518 aa
AA seq
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MQLIPHQDSPRYIRLHPTDNVGVVVNDQGVAAGGQFDDGLTAIEGIPQSHKVALVDIAEG
QEVVRYGEVIGYALKPIAAGSWVTEQVLRMPEPPVLDNLPKATIKTSPGEPLEGYTFEGF
RNPDGSVGTRNILGVTTTVQCVVGVLDHVVERVRKEVLPKYPNVDDVVALSHSYGCGVAI
NAPDAVVPIRTLYNISRNPNLGGQALVISLGCEKLQANQLMDGDQLTNGMDEEDWLFRLQ
DSGTGFTGMVEQIMGMIEERLKVLDQRRRETVPAAELVVGMQCGGSDAFSGITANPALGV
AADLLVRAGATVMFSENTEVRDGIHLLTPRAASVEVADALIREMDWYDRYLQRGMADRSA
NTTPGNKKGGLNNIVEKAMGSIAKSGNSPIAGVVAPGERIRGKGLWFCATPASDFICGTL
QLAAGMNLHIFTTGRGTPYGLSMVPVIKVATRTQLAERWPDLIDVDAGQIVSGRMTLEEM
GWHIFQLYLDVASGRKQTCAEHLRLHNDLVLFNPAPVT
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgattccccatcaggattcgccccgctatatccgcctgcacccgaccgacaac
gttggtgtggtggtcaatgaccagggcgttgccgcaggcggccagttcgacgatggcctg
acggctatcgaaggtatcccgcagagccacaaggtggcgctggtggatatcgccgaaggg
caagaagtggtgcgttatggcgaggtcatcggctatgcgctgaaacccattgccgccggc
agttgggtcaccgagcaggtgctgcgcatgcccgagccgccggtgctggacaacctgccc
aaggcgaccatcaagacctcgcccggcgagccgctggaaggctataccttcgagggcttc
cgcaacccggacggcagcgttggcacccgcaatatcctcggcgttaccaccaccgtgcag
tgcgtggtcggcgtgctcgatcacgtggtcgagcgcgtgcgcaaggaagtcttgcccaag
taccccaacgtcgacgacgtagtggcgctgtcgcatagctacggctgcggcgtggcgatc
aacgcgccggacgccgtggtgccgatccgcaccctgtacaacatcagccgcaaccccaac
ctgggtggccaggcgctggtgatcagcctcggctgcgagaagctgcaggccaaccagttg
atggatggcgaccagctcaccaacggcatggacgaggaagactggctgttccgtctgcag
gattccggcaccggcttcaccggcatggtcgagcagatcatgggcatgatcgaggagcgc
ttgaaagtgctcgaccagcgtcgtcgcgagaccgtgccggctgccgagctggtggtcggc
atgcagtgcggcggcagcgacgccttctccggtatcaccgccaacccggcccttggcgtg
gccgccgacctgctggtgcgcgccggcgccaccgtgatgttctccgaaaacaccgaagtg
cgtgacggcatccacctgctcaccccgcgcgccgccagtgtcgaggtggccgatgcgctg
attcgcgagatggactggtacgaccgctacctgcagcgcggcatggccgaccgcagcgcc
aacaccacgccgggtaacaagaagggcgggttgaacaacatcgtcgagaaggccatgggt
tcgatcgccaagtccggcaacagtccgattgccggcgtggtcgcgccgggcgagcgtatt
cgtggcaagggtctttggttctgcgccacgccggccagcgacttcatctgcggcacgctg
cagctggcggcgggtatgaacctgcacatcttcaccaccggtcgtggcacgccttatggc
ctgtccatggtgccggtgatcaaggtggccacgcgtacccagctggccgagcgctggcca
gatctgatcgacgtcgacgccgggcagatcgtttccggtcgcatgacgctggaggaaatg
ggttggcacatcttccagctctatctggacgtggccagcgggcgcaagcagacctgcgcc
gagcacctgcgcctgcacaacgacctggtgctgttcaacccggcgccggtgacctga
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