Pseudomonas toyotomiensis: JWV26_19440
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Entry
JWV26_19440 CDS
T07285
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pty
Pseudomonas toyotomiensis
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pty03009
]
JWV26_19440 (rimO)
Enzymes [BR:
pty01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JWV26_19440 (rimO)
Ribosome biogenesis [BR:
pty03009
]
Prokaryotic type
ribosomal protein modification factors
JWV26_19440 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QSL91913
LinkDB
All DBs
Position
complement(4182157..4183479)
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AA seq
440 aa
AA seq
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MSTATPKVGFVSLGCPKATVDSERILTQLRMEGYEIVPTYQDADVVVVNTCGFIDSAKAE
SLDAIGEALAENGKVIVTGCMGVAEDSIRDVHPSVLAVTGPQQYEQVVNAVHEVIPPKTE
HNPLIDLVPPQGIKLTPRHYAYLKISEGCNHTCSFCIIPSMRGKLVSRPVGDVLSEAERL
VKAGVKELLVISQDTSAYGVDLKYKLDFWNGQPVKTRMLELCEALSSMGVWVRLHYVYPY
PNVDDVIPLMAAGKLLPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKKWREICPELTIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLEVVPDDVKQDRW
ERFMAHQQAISSARLQAKIGLEMDVLIDEVDSEGAVARSWADAPEIDGSVFIDSPNVKPG
DKVRVRIVDADEYDMWGELV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgccacacctaaagtagggtttgtctcccttggctgtccaaaagcgacggtc
gactccgagcgaatcctgacccaactgcgcatggaaggttacgagatcgttccgacctac
caggatgccgacgtggtggtggtcaacacctgtggcttcatcgacagtgccaaggccgaa
tcgctggacgccatcggtgaagcgctggcggaaaacggcaaggtgatcgtcaccggttgc
atgggcgtggccgaagacagcatccgcgacgtgcacccgagcgtgctggccgtcaccggc
ccgcagcagtacgagcaggtggtcaacgccgtacacgaagtcatcccgccgaagaccgag
cacaacccgctgatcgacctggtgccgccgcaaggcatcaagctgaccccgcgccactat
gcgtacctgaagatttctgaaggctgcaaccatacctgcagcttctgcatcatcccgtcc
atgcgcggcaagctggtcagccgcccggtgggcgatgtgctcagcgaagccgagcgcctg
gtcaaagctggcgtgaaagagctgctggtgatcagccaggacaccagcgcctacggcgtc
gacctgaagtacaagctggacttctggaacggccagccggtgaagacgcgcatgctcgag
ctgtgcgaagcgctgtcgtcgatgggcgtttgggtgcgtctgcactacgtctacccctac
cccaacgtcgatgatgtgatcccgctgatggccgccggcaagctgttgccgtacctggac
atccccttccagcacgccagcccgaaagtactcaagtcgatgaagcgcccggccttcgaa
gacaagaccctggcgcgcatcaagaagtggcgtgagatctgcccggagctgaccatccgc
tccaccttcatcgtcggtttccccggcgagaccgaagaggacttccagtacctgctggac
tggctgaccgaagcgcagctcgaccgcgtcggttgcttccagtattcgccggtcgaaggc
gcaccagccaacgacctgggcctggaagtggtgcctgacgacgtcaagcaggaccgttgg
gagcgcttcatggcgcaccagcaggctatcagctctgcacgtctgcaggccaagatcggc
ctggagatggacgtactgatcgacgaagtggacagcgaaggggccgtggcccgctcctgg
gccgacgccccggagatcgacggcagcgtgttcatcgattcccccaacgtcaagccgggc
gacaaggtgcgcgtgcgcatcgtcgatgccgacgagtacgacatgtggggcgaactggtc
tga
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