Candidatus Pelagibacter ubique: SAR11_0210
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Entry
SAR11_0210 CDS
T00257
Symbol
lysS
Name
(GenBank) lysine-tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAR11_0210 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pub01007
]
SAR11_0210 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pub03016
]
SAR11_0210 (lysS)
Enzymes [BR:
pub01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SAR11_0210 (lysS)
Amino acid related enzymes [BR:
pub01007
]
Aminoacyl-tRNA synthetase
Class I (A)
SAR11_0210 (lysS)
Transfer RNA biogenesis [BR:
pub03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SAR11_0210 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
tRNA-synt_1g
ERAP1_C
tRNA-synt_1
tRNA-synt_1e
sCache_like
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
AAZ21032
UniProt:
Q4FP57
LinkDB
All DBs
Position
complement(210951..212528)
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AA seq
525 aa
AA seq
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MLLNKVIEKDNLDKTNAWPFVEAKKLLRERKSFIDKKGKIILQTGYGPSGLPHIGTFGEV
ARTSMMVNALKQLTDIPTEIITFSDDMDGFRKVPENVPNQELLNNNLHKPLTQVPDPFEK
FSSFGEHNNEMLKDFLNKFNFEYNFQSSSVLYKSGFFNPTLQIILENYQGIMDIILPTLG
KERQKTYSPFLPICPDTGKVLEIPVLEILKEKSKIIFDNNGKKLEVSIFDGNCKLQWKVD
WAMRWYALDIDFEMYGKDLIESAILSSKIIKLIGKTNPSGFAYELFLDEKGEKISKSKGN
GITIDQWLEYASPESLSLYMYQNPKRAKKLYKEIVPKTVDEYLDFIEKAKTQNELQLLMN
PVWHVHNGLIPKEDTIMSFSMLLNLVETSNADSKELLWKFVKKYKKNLLEKEHPIFDNLI
GYAIKYFNDVIKLQKKYKTPDANEKVALEALVKSLDSCNDKMLPEDIQTLIYSTGKENGY
AENLRDWFKLIYEVVFGDENGPRMGFFISFFGVNETKELIKEKIK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
ttgttattaaacaaagtgattgaaaaagataatttagataaaactaacgcatggcccttt
gttgaggctaaaaaattactgcgtgaaagaaagtcctttattgataaaaaaggtaaaata
attttacaaactggttatggtccaagtgggctgccccatataggtacatttggtgaagtt
gcaagaacatcgatgatggttaatgctttaaaacaactcacagatataccaacggaaatc
ataactttctctgatgacatggatggctttagaaaagttccagaaaacgttccaaatcaa
gagctcttaaataacaatcttcataagcctttaactcaagtgccagatccatttgaaaaa
ttttcaagttttggtgaacacaataatgaaatgttaaaagattttttaaataaatttaat
tttgaatataattttcaaagctcttcagttctttataagagtggtttttttaatcccaca
ttacagataatcctagaaaattatcaaggtattatggatataattcttccaacactaggg
aaagaaagacaaaaaacttacagtccatttttaccaatttgtccagacaccggtaaggtt
ttagaaattccagttttagaaatactaaaagaaaaatccaaaattatatttgataataat
ggaaaaaaacttgaggtaagtatcttcgatgggaattgcaaattacaatggaaagtagat
tgggcaatgagatggtacgctcttgatatagattttgaaatgtatggaaaagatctaatt
gaaagtgcaatattatcatcaaaaataatcaagttaattggaaaaacaaacccatctggg
tttgcttatgagctttttttagatgaaaaaggagaaaaaatatccaaatcaaaaggaaat
ggaattacaattgatcagtggctggagtatgcatcacccgaaagtctttcattgtatatg
tatcaaaatcccaaaagagcaaaaaaactatataaagaaatagttcctaaaacagtcgat
gagtacttggactttatagaaaaagctaaaacacaaaatgagttacagctattaatgaat
cctgtttggcatgtgcataatggattaattcctaaagaagatactattatgagcttttca
atgcttttaaatttagtagaaacgagcaatgcagactctaaggagttactttggaagttt
gtaaaaaaatataaaaaaaaccttttagaaaaagaacacccaatttttgataatcttata
ggttatgcgattaagtattttaatgacgtaataaaattacaaaaaaaatacaaaacccct
gatgcaaatgaaaaagttgcattagaagcactggttaagtctcttgatagctgcaatgat
aagatgttgcctgaggatattcagacattaatttattcaacgggaaaagaaaatggttac
gcagaaaacttgcgtgattggtttaaattaatttatgaggttgtttttggagatgaaaat
ggaccaagaatgggattttttataagtttttttggagtaaacgaaactaaagagttaatt
aaagaaaaaataaaataa
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