Candidatus Pelagibacter ubique: SAR11_1218
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Entry
SAR11_1218 CDS
T00257
Symbol
sigB
Name
(GenBank) probable sigma factor SigB regulation protein
KO
K07315
phosphoserine phosphatase RsbU/P [EC:
3.1.3.3
]
Organism
pub
Candidatus Pelagibacter ubique
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pub03021
]
SAR11_1218 (sigB)
Enzymes [BR:
pub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.3 phosphoserine phosphatase
SAR11_1218 (sigB)
Transcription machinery [BR:
pub03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SAR11_1218 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIIE
Motif
Other DBs
NCBI-ProteinID:
AAZ22024
UniProt:
Q4FLB4
LinkDB
All DBs
Position
1164991..1165692
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AA seq
233 aa
AA seq
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MFPKNNEENILLAKNVPSLDVSGDFYNFKNIGDKIFFTLGDVSGKGVDAGLIMARVTALF
EILVEEKKSLIEIVSLINDNLYNLRSGKFLTGIFAVYDKKSKNLEFINAGHSESIISENK
KITEHVSSKIPPLGVQPINLDLNSVLNKISLKDKIFYIYSDGLSESKDFEGNEIEAEGII
DLLNKNKDHDIATQLENIFIEISAFGALQNMSNEEQSIIKDDLTILAINGKNI
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaaagaataatgaggaaaatattcttttagcaaaaaatgtaccttctttggat
gtttctggtgatttttataattttaaaaatataggagataaaatcttttttactcttggc
gatgtttctggcaaaggagtggatgcaggactcattatggcaagagttaccgcattgttt
gaaatccttgttgaggaaaaaaagagtcttattgaaattgtgtcattaataaatgataat
ttatataatttacgttcaggaaaatttttaacaggaatatttgctgtatacgataaaaaa
tctaaaaatcttgaatttattaatgctggccattcagaaagtataatttcagagaataaa
aaaattactgaacatgtttctagcaaaattccgccgcttggagttcagcctattaatctt
gatttaaatagtgttttaaataaaatttcattgaaggataaaattttttatatatacagc
gatggcttaagcgaaagtaaagattttgaaggaaatgaaattgaagctgagggtataata
gatttgttaaataagaataaagatcacgatattgcaacacaattggaaaatatttttata
gaaatttccgcgtttggtgcattgcaaaatatgtcaaatgaagaacaaagtataattaag
gatgatcttacaattttagctattaatgggaaaaatatttaa
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