KEGG   Panthera uncia (snow leopard): 125936977
Entry
125936977         CDS       T08832                                 
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
  KO
K08737  DNA mismatch repair protein MSH6
Organism
puc  Panthera uncia (snow leopard)
Pathway
puc01524  Platinum drug resistance
puc03430  Mismatch repair
puc05200  Pathways in cancer
puc05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:puc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    125936977
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    125936977
  09162 Cancer: specific types
   05210 Colorectal cancer
    125936977
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    125936977
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:puc03400]
    125936977
DNA repair and recombination proteins [BR:puc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     125936977
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II HORMA MUM1-like_PWWP WPP
Other DBs
NCBI-GeneID: 125936977
NCBI-ProteinID: XP_049507402
LinkDB
Position
A3
AA seq 1360 aa
MSRQSTLYSFFPKSPALNNANKASVRASGEGGGAAAATRASASPGGDAAWSEAEPGPLAG
SASPPEARNINGGLRKSAAPAAPHSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIR
EKGKSVRVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSSKPEILRAMQRADE
ALNKDKIERLELAVCDEPSEPEEEEEMEVGATYSSDKSEEDKEIESEEEVPPKVQGSRRS
SRQIKKRRVISDSESDVGGSDVEFKPDAKEEGSSDEISSGVGDSDSEGLDSPVKVASKRK
KMVSGNGALKRKSSRKEMPLATKRSTGISSETKSTLSAFSAPQNSESQAHTGGGCEDSSR
PTFWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNF
DLVIFYKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA
RVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKGTQTYSVLEGDPSENYSKYLLS
LKEKEEDSSGHTRVYGVCFVDTSLGKFFIGQFPDDRHCSRFRTLVAHYPPVQVLFEKGNL
STETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEAYFKEKLNEDSGVMLPQVLKG
MTSESDSLGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDRVSATR
PGAVFAKANQRMVLDAVTLSNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAP
LCSPYAINDRLDAIEDLMAVPDKISDVADLLKKIPDLERLLSKIHNVGSPLKSQNHPDSR
AIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEVADNFKSKILKQVITLQTKNPEGR
FPDLTIELNRWDTAFDHEKARRTGLITPKAGFDPDYDQALADIRENEQSLLEYLEKQRSR
IGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINA
EERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVILF
PEEDTPPFLDLRGSRHPCITKTFFGDDFIPNDILIGCEEEEEENGKAYCVLVTGPNMGGK
STLMRQAGLLAVMAQTGCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASI
LTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNV
AVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAAKLANLPEEIIQKGHRKA
REFEKMTQSLRLFREVCLASERSTIDAEAVPKLLTLIKEL
NT seq 4083 nt   +upstreamnt  +downstreamnt
atgtcgcgacagagcacgctgtacagcttcttccccaagtctccagcgctgaataatgct
aacaaggcctcggtcagggcctcaggtgaaggcggtggtgccgccgctgctacccgggcc
tccgcttctcccggcggggatgcggcctggagcgaggccgagcctgggcccctagcgggc
tctgcgtcgccacccgaggcgaggaacatcaatggagggctgcggaagtcggccgcgccc
gcggccccccacagttcttgtgacttctcaccaggtgatttggtttgggccaagatggag
ggttacccctggtggccttgcctggtttataaccacccttttgatggaacattcatccgc
gagaaagggaagtctgtccgagttcatgtacagttttttgatgacagcccaacaaggggc
tgggttagcagaaggctattaaagccatatacaggttcaaaatcgaaagaagcacaaaaa
ggaggtcatttttatagttcaaagcctgaaatactcagagcaatgcaacgtgcagatgaa
gccttgaataaagacaagatcgagaggcttgaattggcagtgtgtgatgagccctcagaa
ccagaggaagaagaagagatggaggtaggtgcaacttactcatcagataagagtgaagaa
gataaggaaattgaaagtgaagaagaagtgccacctaaggtgcaaggatctaggcgaagt
agccgccagataaaaaaacgaagggtcatatcagactctgagagtgatgttggtggctct
gatgtggaattcaagccagatgctaaggaggaaggaagcagtgatgaaataagcagtgga
gtgggggacagtgacagtgaaggcttggacagccctgtcaaagttgcttcaaaacggaag
aaaatggtgtctggaaatggcgctctcaaaaggaaaagttcaaggaaggaaatgcccttg
gccaccaaacgatcaactggcatttcatcagaaaccaagagcactctgagtgctttctct
gcccctcagaattctgaatctcaagcccacactggtggaggatgtgaggatagtagtcgc
cccactttctggtatcatgaaactttagagtggcttaaggaggaaaagagacgagatctc
cacaggaggcgacctgatcaccccgattttgatgcatccacactctatgtgcctgaggat
ttccttaattcctgtactcctgggatgaggaagtggtggcagattaagtctcagaacttt
gatcttgttattttttataaggtggggaagttttatgagttgtaccacatggatgctctt
attggagtcaatgaactcgggctggtattcatgaaaggcaactgggctcattctggtttc
cctgaaattgcatttggccgatactctgattctctggttcagaagggctataaagtagca
cgagtggaacagactgagaccccggaaatgatggaggcacgatgccggaagatggcacat
atatctaagtatgacagagtggtgaggagggagatctgtagagtcattaccaagggtaca
cagacctacagtgtactggaaggtgacccctctgagaactacagtaagtatcttcttagc
ctcaaagaaaaagaggaggattcctctggccacactcgagtgtatggagtatgctttgtt
gatacctcactgggaaagtttttcataggtcagtttccagacgatcgccactgttctaga
tttaggactctagtggcacactaccctccagtacaagtcttgtttgagaaaggaaatctc
tcaacagaaactaagatgattctgaagggttcattatcctcctctcttcaggaaggtctg
ataccaggctcccagttttgggatgcagccaaaactttgagaactctccttgaagaagca
tattttaaggaaaagttaaatgaggacagtggggtgatgttaccccaggtgcttaaaggt
atgacctcagagtctgattctcttgggttaacaccaggagagaagagtgaattggccctc
tctgctctaggtggttgtgtcttctacctcaaaaaatgccttattgatcaagagctttta
tcaatggctaattttgaagaatacattcccttggattctgacagggttagtgctacaaga
cctggtgctgtttttgcaaaagccaatcaacggatggtgctagatgctgtgacattaagc
aacttggagattttcctgaatggaacaaatggttctactgaagggaccctgctagaaaag
attgatacttgccatactccctttggtaagcggctcctaaagcagtggctttgtgcccca
ctctgtagcccttatgctatcaatgatcgtttagatgctatagaagacctcatggctgtg
cctgacaaaatctctgatgttgcagaccttctaaagaagattccagaccttgagaggctg
ctgagtaaaattcataatgttgggtctcccctgaagagccagaaccacccagatagcagg
gctataatgtatgaagaaactacatacagcaaaaaaaagattattgattttctttctgct
ctagaaggattcaaagtaatatgtaaaattatagagattatggaagaagttgctgacaac
tttaagtctaaaatccttaagcaagtcattactttgcagacaaaaaatcctgagggccgt
tttcctgatttgactatagaactgaaccgatgggatacagcctttgaccatgaaaaggct
cgaaggactggactaattactcccaaagcaggatttgaccctgattatgaccaagctctt
gctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgcagtcga
attggctgtaggaccattgtctactgggggattggcaggaaccgttaccagttggaaatt
ccagagaatttcatcactcgtaatttgccagaagaatatgagttgaaatccaccaagaag
ggctgtaaacgatactggaccaaaactattgagaagaagttggctaatctgataaacgct
gaagagcggagagacgtatcattgaaagactgcatgcggcgactcttctataactttgat
aaaaattacaaagactggcagtctgctgttgagtgcatcgcagtattggatgtcttactg
tgcctggctaactacagtcgagggggtgatggccctatgtgtcgtccagtaattctgttt
ccagaagaagacacaccccccttcttggaccttagaggatcacgtcatccctgcattacg
aagactttttttggagatgactttattcctaatgacattctaataggctgtgaggaagag
gaggaggaaaatggcaaagcttattgtgtgcttgttactggacctaatatggggggcaag
tcgacactcatgagacaggctggcctgttagctgtaatggcccagacgggttgttacata
cctgctgaagtatgcaggctcacacctattgatagagtatttactagacttggtgcctca
gacagaataatgtcaggtgaaagtacattttttgttgaactgagtgaaactgccagtatc
cttacacacgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgca
acatttgatggaacagcaatagcaaatgcagttgttaaagaacttgctgagaacataaag
tgtcgtacattgttttctacccattaccattcattagtggaagattattctcaaaacgtt
gcagtgcgcctgggacacatggcatgcatggtagaaaatgaatgtgaggatcccagccag
gagactattaccttcctgtataaattcattaagggagcttgtcctaaaagctatggcttt
aatgcagcaaagcttgctaatcttccagaggagattattcaaaagggacatagaaaagca
agagaatttgagaagatgacccagtcactgcgattatttcgggaagtttgcctggctagt
gaaaggtcgactatagatgctgaagctgtccctaagttgctgactttgattaaggaatta
tag

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