Pseudomonas umsongensis: HGP31_06195
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Entry
HGP31_06195 CDS
T06842
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pum
Pseudomonas umsongensis
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pum03009
]
HGP31_06195 (rimO)
Enzymes [BR:
pum01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HGP31_06195 (rimO)
Ribosome biogenesis [BR:
pum03009
]
Prokaryotic type
ribosomal protein modification factors
HGP31_06195 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QJC77909
LinkDB
All DBs
Position
complement(1387963..1389300)
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AA seq
445 aa
AA seq
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MSTTPAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHEVVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLNWLTEAQLDRVGCFQYSPVEGAPANDLDLEVVPDDVK
QDRWERFMAHQQAISSARLQMRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGS
NLKPGDKVWCKVTDADEYDLWAEQI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactcctgcgccggccaatcccaaggttggcttcgtatccctgggttgcccc
aaagcactggtcgactccgagcgcatcctcacccagctgcgcatggaaggctatgatgtc
gtgtccacctaccaggacgccgatgtcgtggtggtcaatacctgcggcttcatcgactcg
gccaaggccgagtccctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatc
gtgaccggctgcatgggcgtcgaagaaggcaacatccgcaacgtacacccgagcgtgttg
gccgtcaccggtccgcagcagtacgagcaggtggtcaacgccgtgcacgaagtcgtgccg
ccacgccaggaccacaacccgctgatcgacctggtgccgccacaaggcatcaagctgacc
ccgcgccactacgcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgcggcaagctggttagccgcccggtcggtgacgtactcgacgag
gcccagcgcctggtcaagtccggcgtcaaggagctgctggtgatctcccaggacaccagc
gcctatggtgtcgacgtcaagtaccgcaccggtttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactctgcgaagccctgagcaccctcggtgtctgggtacgcctgcactac
gtttacccgtacccgcacgttgacgagctgatcccgctgatggccgccggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaagtgctgaaggcgatgaaacgc
ccggcgttcgaagacaagaccctggcgcgaatcaagaactggcgcgaaatctgcccggac
ctgatcatccgttcgactttcatcgtcggcttccccggcgagaccgaagaagacttccag
tacctgctgaactggctgaccgaagcccagctcgaccgcgtcggttgcttccagtactcg
ccggttgaaggggctccggccaatgacctggacctggaagtcgtgccggacgacgtcaag
caggaccgttgggagcgcttcatggcgcaccagcaggccatcagctcggcgcgcctgcaa
atgcgcatcggccgtgaaatcgaagtgctggtcgatgaagtcgatgagcaaggcgcggta
ggccgctgcttcttcgatgccccggaaatcgacggcaacgtattcatcgacaatggcagc
aacttgaaaccgggcgacaaagtctggtgcaaagtgaccgacgccgacgaatacgacctg
tgggctgaacagatctag
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