Pseudomonas umsongensis: HGP31_23025
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Entry
HGP31_23025 CDS
T06842
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pum
Pseudomonas umsongensis
Pathway
pum00071
Fatty acid degradation
pum00280
Valine, leucine and isoleucine degradation
pum00310
Lysine degradation
pum00362
Benzoate degradation
pum00380
Tryptophan metabolism
pum00410
beta-Alanine metabolism
pum00640
Propanoate metabolism
pum00650
Butanoate metabolism
pum00907
Pinene, camphor and geraniol degradation
pum00930
Caprolactam degradation
pum01100
Metabolic pathways
pum01110
Biosynthesis of secondary metabolites
pum01120
Microbial metabolism in diverse environments
pum01200
Carbon metabolism
pum01212
Fatty acid metabolism
Module
pum_M00087
beta-Oxidation
pum_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HGP31_23025
00650 Butanoate metabolism
HGP31_23025
09103 Lipid metabolism
00071 Fatty acid degradation
HGP31_23025
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HGP31_23025
00310 Lysine degradation
HGP31_23025
00380 Tryptophan metabolism
HGP31_23025
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HGP31_23025
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HGP31_23025
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HGP31_23025
00930 Caprolactam degradation
HGP31_23025
Enzymes [BR:
pum01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HGP31_23025
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HGP31_23025
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HGP31_23025
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
UDPG_MGDP_dh_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
QJC81044
LinkDB
All DBs
Position
complement(5131727..5133871)
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AA seq
714 aa
AA seq
DB search
MSQAIRYEKGQDRIVVLTIDLPGQSANTMNALYREAMADCVARLQAEKNSIAGVIITSAK
KTFFAGGDLNELIKVDRPQATAFYNRVLSLKGQLRTLETLGKPVVAAINGAALGGGWEIC
LACHHRIALDDPSLQLGLPEVTLGLLPGGGGVVRMVRMLGIEKALPYLLEGKKIRPQQAL
QADLIDDLASDRETLLNKARTWIKANPTAIQRWDVKGFQIPGGTPSNPKVAQMLAIAPSI
LRSKTQGTLPAPEKILCAAVEGAQVDFDTAQLIETRYFTELVTGQVAKNLIGTFWFQLNQ
INAGGSRLEGFAPYVTKKVGVLGAGMMGAGIAFVSASAGVDVVLKDVNLAAADRGKAHSA
ALLDKKLARRQISVEHREAVLARIHTTDNDADLAGCDLIIEAVFEDRELKAKVSSAAQKV
VGADALIASNTSTLPISGLATAVADPSKFIGLHFFSPVEKMPLVEIIKGARTSDETLARG
FDFVLQIRKTPIVVNDSRGFFTSRVFGTFTNEGIAMLGEGVCAAMIETEARKAGMPVGPL
AISDEVSLSLMSHIRQQTAKDLQAEGKALVEHPAYAVIDLLLSEYKRAGKAAGGGFYEYP
AGGQKQLWPELKTRFEKADRQISPKDVRDRLLFVQAIETVRCVEEGVLTSTADANIGSIF
GIGFAAWTGGALQFINQYGVKDFVARAQYLAGQYGERFAPPALLLEKAAKGEAF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagccattcgctacgaaaaaggccaggaccggatcgttgtcctgaccatcgac
ctgccgggccagagcgccaacaccatgaatgcgctttaccgcgaagccatggccgactgt
gtcgcccgcctgcaggccgaaaaaaacagcatcgcgggtgtgatcatcacctcggccaag
aaaaccttctttgccggcggcgatctcaatgagctgatcaaggtcgacaggccccaggcc
acggctttttacaacagggtgctgagcctcaagggccaactgcgcaccctggaaaccctt
ggtaaacccgtggtcgccgcaatcaatggcgcggcgttgggtggaggctgggaaatctgc
ctcgcttgccatcaccgcatagcgctggacgatccctccctgcaactcggcctgccggaa
gtgaccctcggtttgctgccggggggtggcggcgtggtacgcatggtgcgaatgttgggc
attgaaaaagccctgccgtacctgctcgaaggcaagaaaatccgcccgcagcaggccttg
caggcggatctgatcgatgacctggcgagcgatcgcgagacgctgctgaacaaggcacgc
acttggatcaaggccaatccgacggcgatccagcgctgggatgtgaagggctttcagatt
ccaggtggcacgccgtcgaacccgaaagtcgcccagatgctggcgattgcaccgtctatc
ctgcgcagtaaaacccagggtacgttgcccgcgccggagaaaatcctgtgtgcggcggtg
gagggtgcccaggtggatttcgacacggcgcagctgattgaaacccgctacttcacagaa
ctggtcaccggccaggtcgcgaaaaacctgattggcaccttctggttccagctcaaccag
atcaatgccggtggttcgcgtcttgaaggtttcgcgccttatgtgacgaaaaaagtcggc
gtgctcggcgccgggatgatgggggcgggtatcgcttttgtcagcgcgtcggccggtgtc
gacgtggtgctcaaggacgtcaacctggcagcggccgataggggcaaggcgcattcagcg
gcgttgctggacaagaaattggcgcgccggcagatcagcgttgagcaccgtgaagccgtg
ctggcgcgcatccataccacggacaacgatgccgatctggcgggttgcgacttgatcatc
gaagcggtattcgaggaccgtgagctgaaggccaaagtctcctcggccgcgcaaaaagtg
gtgggcgccgatgcactgatcgcctccaacacctcgaccctgccgatcagtggcctcgcc
accgcggtggcggacccaagcaagttcattggcctgcatttcttcagccccgtggaaaaa
atgccattggtggaaatcatcaagggcgcccgcaccagcgacgaaaccctggcccgcggg
ttcgatttcgtcctgcaaatccgcaaaacccctatcgtcgtcaacgacagtcggggtttc
ttcacctctcgggtgttcggcacgttcaccaatgaaggcattgccatgctgggtgaaggc
gtctgcgcggcgatgatcgagaccgaggcgcgcaaggctggcatgccagtcggacctctg
gcgatctccgacgaagtttccctcagcctcatgagccatatccgccagcaaaccgccaag
gacctgcaggcagagggcaaggcgctggtcgagcacccggcgtacgccgtgattgacttg
ctgctcagcgagtacaagcgtgctggcaaggccgccgggggcgggttctatgaatacccg
gcgggcgggcaaaaacaattatggccagaactgaaaacccgctttgaaaaggctgacagg
cagatttcgcccaaggatgtgcgcgatcgcctgctgtttgtacaagccatcgaaaccgtg
cgctgtgtggaggagggtgtgctgacgtcgacggcggatgccaatatcggctcgatcttc
ggcatcggtttcgctgcctggaccggcggtgcactgcagttcatcaatcagtacggggtc
aaggacttcgtcgcccgcgcccagtacctggccgggcaatacggcgagcgctttgcaccg
ccggccctgctgctggaaaaagccgccaagggcgaggcgttttag
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