Pantoea vagans C9-1: Pvag_0770
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Entry
Pvag_0770 CDS
T01326
Symbol
ycbY
Name
(GenBank) UPF0020/UPF0064 protein ycbY
KO
K12297
23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.264
2.1.1.173
]
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pva03009
]
Pvag_0770 (ycbY)
Enzymes [BR:
pva01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
Pvag_0770 (ycbY)
2.1.1.264 23S rRNA (guanine2069-N7)-methyltransferase
Pvag_0770 (ycbY)
Ribosome biogenesis [BR:
pva03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pvag_0770 (ycbY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
Methyltrans_SAM
THUMP
Cons_hypoth95
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
ADO08972
LinkDB
All DBs
Position
816224..818338
Genome browser
AA seq
704 aa
AA seq
DB search
MNSLFASTARGLEELLKSELDALGAQDLQVVQGGVHYEADDRAMYQSLMWSRLASRILLP
LGEFGVYSDLDLYLGVQSVDWPSMFGSDKTFVVHFSGTNDSIRNSQFGALKVKDAIVDSF
TRQNLERPNVDREQADIRVNVWLNDDRASIALDLSGTSLHQRGYRQQTGQAPLKETLAAA
IVLRSGWEPTTPLIDPMCGSGTLLIEAALIACDRAPGLLRKHWGFTAWYKFDAALWQDVK
TEAQNRARAGTAATQARFFGYDNNGRVLEWAQANARRAGVFELFTFAQQDLLQLTNPLDP
AVHGTVLSNPPYGERLESEPALIALHSQLGRLMKQHFGGWNLSLFSASPELLSCLQLRAD
RQFKAKNGPLDCVQKNYQLAVNSHESAGQIAEDYANRLRKNVKKLEKWARQEGIECYRIY
DADLPDYNVAVDRYGDWVIIQEYAPPKTIDPNKARQRLFDVISATLSVLQLPADRLIMKT
RERQKGKAQYQKLSEKGDYFEVKEFNARFWVNLTDYLDTGLFLDHRIARKMLGQMSQGKD
FLNLFAYTGTASVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRQHRLMQADCLSW
LNESDENFDLIFIDPPTFSNSKRMEESFDVQRDHMMLMRNLKRLLRRGGTIMFSNNKRGF
KMDMDGLKALGLQAQDITQKTQSQDFARNRQIHNCWLITHAGKE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaattctctgtttgccagcacggcgcgtgggctcgaagagctgttaaaaagtgagctg
gacgcgctgggcgcgcaggatttgcaagtggtgcagggaggcgttcactacgaagccgac
gatcgcgccatgtaccaaagcctgatgtggagtcgtttagcatcacgcatcctgttgccg
ctgggagagtttggcgtctacagcgatctcgatctctatctgggtgtacagagcgtggac
tggccgtcgatgttcggcagcgacaaaacgttcgtcgtgcatttcagcggcaccaacgat
tcgattcgtaacagccagttcggcgcgctgaaagtaaaagatgccatcgtggacagcttt
acccgtcagaatcttgaacggccgaatgtcgatcgtgagcaggcggatatccgtgttaac
gtctggctgaatgacgatcgcgccagcattgcgctggatctcagcggcacctcactgcat
cagcgcggctatcgccagcagaccggtcaggctccgttaaaagagaccctggcggcggca
attgtgctgcgttctggctgggagccgaccacgccgctgatcgacccgatgtgtggttca
ggtacgctgctgattgaagcggcgctgattgcctgcgatcgcgcaccgggcctgctgcgt
aagcactggggcttcactgcctggtacaagtttgatgctgcgctgtggcaggacgtgaaa
accgaagcgcagaaccgtgcccgcgcgggcacggccgccacccaggcgcgcttctttggc
tatgacaacaatggccgggtgctggagtgggcgcaggcgaatgcccgtcgtgctggcgtc
tttgaactctttacatttgcgcaacaggacctgctgcaactgaccaatccgctcgatccg
gcggttcacggcacagtgctgagtaacccgccgtacggtgaacgtctggagagcgagccg
gcgctgattgcgctgcacagccagctcggtcgtctgatgaagcagcattttggcggctgg
aacctgtcgctgttcagcgcctcgcctgaactgctgagctgcctgcaactgcgagccgat
cgccagtttaaagcgaagaacggtccgctggattgcgtgcagaaaaactatcagctggcg
gttaacagccatgaaagcgcgggacagattgcggaagattacgcaaaccgtctgcgtaaa
aatgtgaagaagctggagaagtgggcgcgtcaggaaggcattgaatgctaccgcatttat
gatgccgatctgccagactacaacgttgctgtcgatcgctatggtgactgggtcattatt
caggaatacgcgccaccgaaaaccatcgatccgaataaagcgcgtcagcgcctgttcgat
gttatcagcgcgacactgagcgtactgcagctgcctgctgaccgtctgattatgaaaacg
cgtgagcgccagaaaggcaaagcgcagtatcagaagctcagcgagaagggcgactatttc
gaagttaaagagtttaatgcgcgtttctgggtgaacctgaccgactatctcgacaccggc
ctgttcctcgatcaccgcattgcccgtaaaatgctcggtcagatgagtcagggcaaagat
ttcctgaacctgtttgcctataccggcaccgccagtgtgcatgccggtctggggggggcg
cgttcaaccaccacggtagatatgtcgcgtacctatctggagtgggcggagcgcaacctg
cgtcttaacggactgaccgggcgtcagcaccgcctgatgcaggcggactgcctgagctgg
ctgaatgagagtgatgagaattttgacctgatctttatcgatccgccaaccttctccaac
tcaaaacgtatggaagagagcttcgacgttcagcgcgatcatatgatgctgatgcgtaac
ctgaaacgccttctgcgtcgcggcggcaccatcatgttctccaataacaaacgtggtttc
aaaatggacatggatggtctgaaagcactgggcctgcaggcgcaggatattacccagaaa
acgcagtcgcaggacttcgcgcgtaaccgtcagattcacaactgctggctgatcactcat
gccggtaaggaataa
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