Pantoea vagans C9-1: Pvag_3181
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Entry
Pvag_3181 CDS
T01326
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva00540
Lipopolysaccharide biosynthesis
pva01100
Metabolic pathways
pva01250
Biosynthesis of nucleotide sugars
Module
pva_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Pvag_3181 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pva01005
]
Pvag_3181 (rfaD)
Enzymes [BR:
pva01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
Pvag_3181 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pva01005
]
Core region
Pvag_3181 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
NAD_binding_10
DUF6716
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
ADO11323
UniProt:
E1SIS1
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All DBs
Position
3356214..3357146
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AA seq
310 aa
AA seq
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MIIVTGGAGMIGSNIVKALNDRGHTDILVVDNLKDGTKFANLVDLDIVDYMDKEEFLMSV
MAGDDLGPIEAVFHQGACSSTTEWDGKYMMENNYQYSKELLHFCLEREIPFLYASSAATY
GGRNENFIEERQYEQPLNVYGYSKMLFDHYVRQMLPEANSPVCGFRYFNVYGPREGHKGS
MASVAFHLNTQISNDENPKLFEGSDGFKRDFIHVDDVAEVNLWCWENGVSGIYNCGTGRA
ESFQEVADAVLKFHQKGQIEYIPFPEKLKGRYQAYTQADLTKLRAAGYDKPFKTVAQGVA
EYMVWLNRNA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaactggcggcgcaggaatgattggcagcaacatcgtcaaagcgctgaac
gatcgcggtcacaccgacattctggtggtggataatctgaaggatggcaccaagtttgcc
aatttagtcgacctggatatcgtcgattacatggacaaagaagagttcctgatgagcgta
atggcgggcgatgatttaggcccgatcgaagcggtattccatcagggtgcctgctcctcc
accactgagtgggatggcaagtacatgatggaaaacaactatcagtactccaaagagttg
cttcacttctgtcttgagcgcgagatcccgttcctctacgcctcttctgctgcgacctac
ggcggacgcaacgagaatttcattgaagagcgccagtatgagcagccgctgaatgtctat
ggctactccaagatgctgttcgaccactacgtccgtcagatgctgccggaagcgaactcg
ccggtgtgcggcttccgctatttcaacgtctacggcccgcgcgaaggccacaaaggcagc
atggccagcgttgccttccatctgaacacgcagatcagcaacgatgaaaatccaaaactg
tttgaaggcagcgatggctttaaacgtgatttcatccacgttgatgatgtggcagaagtg
aatctgtggtgctgggaaaatggcgtctccggaatctataactgtggtacaggccgcgcc
gaatccttccaggaagtggctgatgcggtactgaagttccaccagaaaggtcagatcgag
tacatcccgttcccggaaaaactcaaaggacgctatcaggcttatacccaggccgatctc
actaaattgcgtgctgccggttacgacaagccctttaaaacggtggcgcagggcgtcgct
gaatatatggtctggctgaaccgcaacgcataa
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