Polaromonas vacuolata: HC248_00684
Help
Entry
HC248_00684 CDS
T06542
Symbol
ligB
Name
(GenBank) Protocatechuate 4,5-dioxygenase beta chain
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
pvac
Polaromonas vacuolata
Pathway
pvac00362
Benzoate degradation
pvac00627
Aminobenzoate degradation
pvac01100
Metabolic pathways
pvac01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HC248_00684 (ligB)
00627 Aminobenzoate degradation
HC248_00684 (ligB)
00624 Polycyclic aromatic hydrocarbon degradation
HC248_00684 (ligB)
Enzymes [BR:
pvac01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
HC248_00684 (ligB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
QJC55405
UniProt:
A0A6H2H6C4
LinkDB
All DBs
Position
717894..718775
Genome browser
AA seq
293 aa
AA seq
DB search
MAKITASVFTSHVPAIGAAIDLGKTTEPYWQPLFKGYEWSKQWLKDNPPDVVILVFNDHA
TAFSLDMIPTFAIGTAEAYQPADEGWGPRPVPVVQGHAELAAHIAHSVIQQDFDLTIVNK
MDVDHGLTVPLSLMCGQPEAWPCPVIPFAVNVVQYPVPSGQRCFNLGKAIRKAVESYDEN
LNVQIWGTGGMSHQLQGPRAGLINPVFDNAFLDQLISDPAALAAKPHIDYVREAGSEGIE
LVMWLIARGAMSDVAYDAADLDAAKAHSVKVKHRFYHVPASNTAVGHLILENS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaattaccgcctctgtttttacctcacatgtacccgccatcggtgcggcgata
gatttaggcaagacgaccgaaccgtattggcaaccgcttttcaagggctatgaatggtct
aagcagtggcttaaagataacccgcccgatgtagtgattttggtgtttaacgatcacgcc
acggcctttagtttggacatgattcctacctttgcaattggcacggccgaggcttaccaa
cccgctgacgagggctggggaccgcgccccgtgcccgtcgtacaaggccatgcagagctg
gccgcgcacatcgcgcattcggtcatacagcaagactttgatctgacgattgtcaacaaa
atggacgtcgatcacggtctaaccgtgcccttgagtttgatgtgcggccaacccgaggct
tggccttgcccggtgattccttttgctgtgaatgtggtgcagtacccggtgcccagtggt
cagcgctgttttaatcttggcaaggcgattcgcaaagcagtcgagagctacgacgaaaat
ttaaacgtgcagatctggggcacaggcggtatgagccaccaattgcaaggcccgcgcgct
ggcttgattaacccagtttttgacaacgcttttttagaccagttgatctctgacccagca
gcactcgccgccaagccgcacatcgactatgtgcgcgaagccggctctgaaggcattgag
ttggtgatgtggctaatcgcccggggggcaatgtcagatgtcgcttacgatgcggcagac
ctagatgcggccaaggcccactcggtcaaagtcaagcaccgtttctatcatgtcccggcg
tccaacactgccgtgggccacttaattttggagaatagctga
DBGET
integrated database retrieval system
