Planctoellipticum variicoloris: SH412_005253
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Entry
SH412_005253 CDS
T09866
Symbol
crtI
Name
(GenBank) phytoene desaturase family protein
KO
K10027
phytoene desaturase [EC:
1.3.99.26
1.3.99.28
1.3.99.29
1.3.99.31
]
Organism
pvar
Planctoellipticum variicoloris
Pathway
pvar00906
Carotenoid biosynthesis
pvar01100
Metabolic pathways
pvar01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
SH412_005253 (crtI)
Enzymes [BR:
pvar01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.99 With unknown physiological acceptors
1.3.99.26 all-trans-zeta-carotene desaturase
SH412_005253 (crtI)
1.3.99.28 phytoene desaturase (neurosporene-forming)
SH412_005253 (crtI)
1.3.99.29 phytoene desaturase (zeta-carotene-forming)
SH412_005253 (crtI)
1.3.99.31 phytoene desaturase (lycopene-forming)
SH412_005253 (crtI)
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_oxidored
FAD_binding_2
Pyr_redox_2
Thi4
Pyr_redox_3
HI0933_like
FAD_binding_3
Pyr_redox
GIDA
Lycopene_cycl
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
WLD15055
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All DBs
Position
6755615..6757171
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AA seq
518 aa
AA seq
DB search
MQRFDAVIVGAGPGGLAAALQLANAGLKVRILERRSTVGGRTSALETPDFRFDLGPTFFL
YPRVLQEIFQSIGRDLHQEVPMVRLDPQYRLLFGAGGQLDATGDIPRMEAALREFSEHDA
GNFRKFLEDNRTKLAKFRPILESSWSRWTDLLSPTMLKMLPWVRPWASVDDDLKRYFHDP
RLRLAFCFQSKYLGMSPFRCPSLFSILSFLEYEHGVWHPMGGCSAVSERMAQIALEMGVE
ISTDEPVEELVFAGRRVIGVKTRRDEYRTDSLVINADFSRAMQRLVPDSLRRRWSDKALK
KKQYSCSTFMMYLGIDGLYEHLAHHTIYIARDYDRNLADIEQRHVLSADPSVYVQNACIT
DPTLATTGGSTLYVLAPVTHQHPNVDWSVETPRFRDAVLRQLEERFGLTDLRSRIRYERI
VTPADWDQQHEIHLGATFNLAHSLKQMLHLRPQNRFEDLEGVYLVGGGTHPGSGLPVIYE
SSRISTRLLLEDRGGALGRRPVEAPAFCPRSDHELVTH
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcagagattcgacgcggtcatcgtcggcgccggccccggcggccttgccgccgctcta
cagcttgccaacgccggcctcaaagtcagaattctagaacgacgaagtaccgtcggcggt
cggacctcggcgctcgaaactcccgatttccgcttcgacctcggcccgacgttcttcctt
tacccccgcgtgctccaggaaatctttcagtcgatcggtcgagatctccaccaggaagtc
ccgatggtccggctcgatccgcagtaccgattgctgttcggtgcggggggccagctcgac
gccaccggtgatattccgcgaatggaagccgccctccgcgaattcagcgagcacgacgcc
gggaacttccggaagttcctggaagacaaccggaccaagctggcgaagttccgccccatt
ctggagtcctcgtggtcgcgatggaccgacctgctctcccccaccatgctcaagatgctg
ccgtgggtccgtccgtgggcctcggtcgatgatgatctgaaacggtactttcacgacccc
cggttgcggctcgcgttctgcttccagtccaaatacctggggatgtcgccgttccgctgc
ccgagtctcttctcgattctctccttcctggagtacgaacatggcgtgtggcatccgatg
gggggctgcagcgccgtcagcgaacgcatggcccagatcgccctcgaaatgggcgtcgag
atctcgaccgacgaaccggtcgaggaactggtcttcgccggtcggcgcgtgatcggcgtc
aagacccggcgggacgaataccgcaccgactcgctggtgatcaacgccgacttctcgcgg
gcgatgcagcggctggtccccgattccctccgccgccgctggtcggacaaggcgctcaag
aaaaaacagtactcctgctcgacgttcatgatgtacctggggatcgacgggctctacgag
cacctggcccatcacaccatctacatcgccagggactacgaccggaatctggcggacatt
gaacaaagacacgtcctgtcggctgatccgtcagtctacgtccagaacgcctgcatcacg
gatccgactctggcgacgactggcggcagtacgctttacgtgctggcccccgtcacgcat
cagcatccgaacgtcgactggtccgtcgagacgccgcgtttccgcgacgctgtcctccgc
cagctcgaagaacgcttcgggctgacagacctccgcagtcggatccgctacgaacggatc
gtcacccccgcggactgggaccagcagcatgagattcatctcggcgcgacgttcaatctc
gcccattcgctgaaacagatgctccatctgcgaccgcagaaccgcttcgaagacctcgaa
ggggtttatctggtcggagggggaactcatcccggcagcggcctgccggtcatctacgag
tcgagccggatttccacccggctgctgctggaagatcgcggcggagctctcggccggcgg
ccggtggaggcccccgccttctgtccccgatcggatcacgaactggtgacacactga
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