Pseudoalteromonas viridis: J5X90_05555
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Entry
J5X90_05555 CDS
T07232
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb00071
Fatty acid degradation
pvb00280
Valine, leucine and isoleucine degradation
pvb00310
Lysine degradation
pvb00362
Benzoate degradation
pvb00380
Tryptophan metabolism
pvb00410
beta-Alanine metabolism
pvb00640
Propanoate metabolism
pvb00650
Butanoate metabolism
pvb00907
Pinene, camphor and geraniol degradation
pvb00930
Caprolactam degradation
pvb01100
Metabolic pathways
pvb01110
Biosynthesis of secondary metabolites
pvb01120
Microbial metabolism in diverse environments
pvb01200
Carbon metabolism
pvb01212
Fatty acid metabolism
Module
pvb_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
J5X90_05555 (fadB)
00650 Butanoate metabolism
J5X90_05555 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
J5X90_05555 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
J5X90_05555 (fadB)
00310 Lysine degradation
J5X90_05555 (fadB)
00380 Tryptophan metabolism
J5X90_05555 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
J5X90_05555 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
J5X90_05555 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
J5X90_05555 (fadB)
00930 Caprolactam degradation
J5X90_05555 (fadB)
Enzymes [BR:
pvb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
J5X90_05555 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
J5X90_05555 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
J5X90_05555 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
J5X90_05555 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QTL36512
LinkDB
All DBs
Position
1:complement(1306808..1308970)
Genome browser
AA seq
720 aa
AA seq
DB search
MLMKRESFVVDFCKGKIAEFKFCMPGSVNKLSQQTLQDCHAALKELAQRDDIDGLIFSSD
KDHFIVGADIFEFLPTFDRPEAELVEWIKAATDVFDALEDLPFPTLSAVNGLALGGGCEW
VLATDYRIASDSAKIGLPEVKLGIMPGFGGTVRLPRLIGADNAMTWITTGKENRAADALK
VGAVDAVVAQDKLMDAALRTMEQAAAGKLDWRAKRQVKLDPLKMNRVEQGMSFAMAEGMV
MAKTKGHYPAPVMAVKTIKTAANMGRDEAMAVENASFAKLAKTAEAAAQTGIFLADQYIK
GVAKKQAKQSQTDIKQAAVLGAGIMGGGIAYQSAYKGTPIVMKDISQGALDLGMGEAAKL
LGKKVERGHMKLDKMVGTLAQIKPTLNDRDLEGSDIIVEAVVENPQIKKTVLAGLEKQLP
QGTILTSNTSTIRIDELAEGLERPEHFCGMHFFNPVPKMPLVEIIRGAKTSDETVAAVVD
YALKLGKSPIVVNDCPGFFVNRVLFPYFAGFSQLVVEGADFTQVDKVMENVFGWPMGPAY
LLDVVGIDTANHCTGVMADGFPTRMARQEKDPVAHLANANRYGQKNQKGFYQYAPDRKGR
LKKSKDADAVALLSEICDAPAQFDKQTIIERCMVPMINEVLLCLQEGIVASPQEADMALI
YGIGFPPFRGGAFRYLDQLGLAEFVKIADKYAHLGEIYQVSEQTREWAAAGKVFYKVEGQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgaaacgcgagtcctttgtagtggatttctgcaaaggcaaaatcgctgagttt
aaattttgtatgccaggttcggtcaacaaattgtctcagcaaaccctgcaagattgtcat
gcggcgctcaaagagttggcgcaacgcgatgacatcgacggcctgatctttagctccgac
aaagaccactttattgtgggtgccgatatcttcgaatttttgcctacctttgaccgcccg
gaagccgagctggttgagtggatcaaagcggccactgacgtatttgacgcgttagaagat
ttacctttcccgaccttgtctgcggtcaatggtctggcactgggtggcggctgtgagtgg
gtacttgctaccgattatcgtattgcctctgacagcgccaagatcggcctgccagaagtg
aagctgggcattatgccgggctttggtggtactgtgcgtctgccgcgtctaattggtgca
gacaacgcgatgacctggatcaccacaggtaaagagaaccgcgcagccgatgccctgaaa
gtaggcgccgtggatgcggtggttgctcaggacaagctgatggacgcggcactgcgtacc
atggaacaagcggcagctggcaaactggactggcgcgccaaacgtcaggttaagcttgac
ccgctgaaaatgaaccgcgttgagcaaggcatgagctttgcaatggcagaaggcatggtg
atggccaaaaccaaaggtcactacccggcacctgtgatggcggttaaaaccatcaagact
gctgccaatatgggtcgcgatgaagccatggccgttgagaacgcgagcttcgccaagctg
gccaagaccgctgaagcggcggcacaaaccgggatcttcctggccgatcagtacattaaa
ggcgttgccaagaaacaagctaagcaaagccagactgacatcaaacaagctgcggtactg
ggcgcgggcatcatgggcggcggtatcgcttatcagtcagcgtacaaaggcacgccgatt
gtcatgaaagacatcagccagggcgcactggacttaggtatgggcgaagcggccaagctg
ctgggcaaaaaagtcgagcgcggccacatgaagctggacaaaatggttggcacactggcg
cagatcaaaccaacgcttaatgaccgtgatctggaaggcagcgacatcatcgttgaagca
gttgtcgagaacccgcaaatcaagaaaaccgtactggcgggtcttgagaaacagctacca
caaggcactattctgacttcaaatacctcaaccattcgcattgatgaactggctgaaggt
ctggagcgtcctgagcacttctgtggtatgcacttctttaacccggtgcctaagatgcca
ttggttgaaatcatacgtggcgcaaaaacctcggatgaaaccgttgccgcggttgtcgac
tatgcactgaaactgggcaagtcgccgattgttgtgaacgactgtccgggtttcttcgtg
aaccgcgtactgttcccttactttgctggtttcagccagctcgtcgtggaaggtgctgac
ttcacacaagtcgataaagtgatggaaaatgtctttggctggccgatgggtccggcttac
ctgctggacgttgtgggtatcgacacagccaatcactgtactggcgtgatggcggatggt
ttcccaacccgcatggcacgtcaggaaaaagatccggttgcccacctggccaacgccaat
cgctatggacagaaaaaccagaaaggtttctaccagtatgcgcctgatcgcaaaggccgc
ctgaagaagagcaaagacgcagacgccgttgccctgctgagcgagatttgtgatgcaccg
gcacagtttgacaaacaaaccatcatcgagcgctgtatggtaccgatgatcaacgaagtt
ctgctgtgtctgcaagaaggcattgtagcctcaccgcaagaagccgatatggcgctgatc
tacggcattggcttcccgccgttccgtggtggtgcattccgttatctggatcaactgggt
ctggcagaattcgtgaaaatcgccgataagtacgcacacttaggcgaaatctatcaggtg
tcggagcaaacccgtgaatgggcagctgccggtaaagtattctacaaagtggagggtcag
taa
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