Pseudomonas viridiflava: CFBP1590__4628
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Entry
CFBP1590__4628 CDS
T06554
Symbol
garD
Name
(GenBank) Probable D-galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd00053
Ascorbate and aldarate metabolism
pvd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
CFBP1590__4628 (garD)
Enzymes [BR:
pvd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
CFBP1590__4628 (garD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
SMS12214
UniProt:
A0A1Y6JQV6
LinkDB
All DBs
Position
I:complement(5145708..5147261)
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AA seq
517 aa
AA seq
DB search
MNLIQHADSPRYIRLHPLDNVVVVVNDQGVPAGTEFDNGLVTVDNVPQSHKVSTVDLAEG
DAVIRYGHTIGYALQPIPRGSWVREDQLRMPSAPALDSLPMSDAVPAKGEPLEGYTFEGY
RNADGTVGTRNILGITTTVQCVTGVLDFAVKRIRDELLPKYPNVDDVVALTHSYGCGVAI
TATDAYIPIRTVRNLARNPNLGGEALVISLGCEKLQAGQVMHEGDSSVDLSEPWLYRLQD
SSHGFSEMVEQIMDLAEVRLKKLDLRRRETVPASELILGMQCGGSDAFSGITANPALGYA
SDLLLRAGATVMFSEVTEVRDAIYLLTSRAQDQDVAQALVREMDWYDRYLAKGEADRSAN
TTPGNKKGGLSNIVEKSLGSIVKSGSSAINGVLGPGERVNGKGLIFCATPASDFVCGTLQ
LAAGMNLHVFTTGRGTPYGLAMAPVVKVSTRTELAQRWPDLIDIDAGRIATGRASIEDLG
WELFHYYLEVASGKKKTWTEHYRLHNDITLFNPAPIT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgattcaacatgccgattctccacgttacatccggctgcatccgctggataac
gtggtggtcgtggtcaacgaccagggtgtgccggccggaaccgaattcgataacggcctg
gtgactgtcgataacgtaccgcagagccacaaggtcagcaccgttgacctggccgagggc
gacgccgtgattcgttacggccataccatcggctacgccctgcaaccgataccgcgtggc
agttgggtcagggaagaccagttgcgcatgccgtcagcgcccgcgctcgacagcctgccg
atgtccgatgccgtacctgcgaagggcgagccgctggaaggctacaccttcgaaggctat
cgcaatgccgatggcaccgtaggcactcgtaacattctgggcatcaccactaccgtgcag
tgcgtgaccggcgtgctcgacttcgccgtcaagcgcatccgcgatgaactgctgcccaaa
tacccgaacgtcgatgacgtggtggcgctgacccacagctacggctgcggtgtagccatc
accgccaccgacgcctatatcccgatccgcactgtgcgtaacctggcgcgcaacccgaac
ctgggtggcgaggcgctggtgatcagtctgggctgtgaaaagctgcaggccggccaggtg
atgcacgagggcgacagctcggtggacctgagcgagccctggctctacaggcttcaggac
tccagccacggtttcagtgaaatggtcgagcagatcatggatctggctgaagtgcgcctg
aagaagctggacctgcgtcgtcgcgagacggtaccggcctccgagctgattctgggcatg
cagtgcggcggcagcgatgcgttttccggcatcaccgccaacccggcgctgggctatgca
tccgacctgttgctgcgtgcaggcgccactgtgatgttttccgaagtgaccgaagtgcgt
gatgccatctatctgctcacctcccgtgcgcaggatcaggacgtcgcccaggcgctggtg
cgcgaaatggactggtacgaccgttacctggccaaaggcgaagcggatcgcagtgccaac
accacgccgggcaacaagaagggcgggttgtcgaacattgtcgagaagtccctcgggtcg
atcgttaagtcaggcagcagcgccatcaacggcgtgctcggccctggtgagagggtcaat
ggcaaagggctgatcttctgcgccacaccggccagtgactttgtgtgcggcacgctgcaa
ctggcggccgggatgaatctgcacgtgttcaccaccgggcgcggcacaccgtatggtctg
gcgatggctcctgtggtgaaggtgtcgacccgcaccgagctggcccagcgctggccggac
ctgatcgacatcgacgcaggccgcatcgcgacaggacgcgccagcatcgaggatctgggg
tgggagctgttccactactacctggaagtggccagcggcaagaaaaagacctggaccgag
cactaccgcctgcacaacgacatcaccctgttcaaccctgcgccgattacctga
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