Pandoraea vervacti: UC34_16440
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Entry
UC34_16440 CDS
T03688
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
pve
Pandoraea vervacti
Pathway
pve00190
Oxidative phosphorylation
pve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
UC34_16440
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UC34_16440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pve03019
]
UC34_16440
Enzymes [BR:
pve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
UC34_16440
Messenger RNA biogenesis [BR:
pve03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
UC34_16440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
AJP59822
LinkDB
All DBs
Position
3764229..3766343
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AA seq
704 aa
AA seq
DB search
MKNSRQSHVFRTFNMNYPLLNRELGILAFNERVLAQAADPATPLLERLRFVCIVSSNLDE
FFEIRVAGLKEQMRENPGMLTPDGMTFQQVYTQVCARAQALVEKQYAMFDSLLPLMEAEG
IAFHPSGSWNDAQVEWARDYFLRELVPVLTPIGLDPAHPFPRVLNKSLNFAVELEGKDAF
GRDAELAIVQAPRALPRLVPMPAALAPLPNSFVLLSSLMLRFASELFPGLTAKACHQFRV
TRNSDLFVDEDEITNLRTALQGELPARHLGDAVRLEVDAGAPARLVRRLQTECGLADSDC
YRVKGPVNLVRLMPLPEMVDRPDLKFVPFVPALPKRMSASPAMFDLIDQGDLLLHHPYDS
FQPVLELLLQAARDPDVVAIKQTIYRTGNESALMDALMEAARNGKEVTVVVELLARFDEE
TNINWAARLEAVGAHVVYGVVGHKCHAKMLLVVRRTRQGKKTFLKRYVHLGTGNYHPRTA
RLYTDFGLMTADEALCADVHVVFQQLTGIGRQTHLHGLWQSPFTMHSHLLEAIRRETEAA
MAGKKARIIAKMNALLEPTIIAELYKASRAGVKIDLIVRGVCALRAGVKGLSENITVRSI
VGRFLEHHRIYYFYANGDEHVMLSSADWMERNFFRRVEVAFPVRDKRLKARVIREGLMVH
LRDNTLSWLMRADGSYVRRKAGKTPYNSQMVLMQEITQHVQTGN
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattcacgccaatcccatgtctttcgcacgttcaacatgaattacccgctgctc
aaccgcgagctgggcattctcgcgttcaatgaacgcgtgcttgcccaggcggccgatccg
gccacgccattgctcgagcgcctgcgcttcgtctgtatcgtgagtagcaatctggatgaa
ttcttcgaaattcgcgtcgccggactcaaggagcagatgcgcgagaatccgggcatgctc
acgcccgacggcatgacgtttcagcaagtttacacgcaagtctgcgcccgggcacaggcg
ctcgtcgagaagcaatatgccatgttcgacagcctgctcccgctcatggaggccgaaggc
atcgcctttcacccgtccggcagctggaacgacgcgcaagtcgaatgggcgcgcgactat
ttcctgcgcgaactggtccccgtactcacccccatcgggctggatcccgcgcacccattc
ccgcgcgtgctcaacaagagcctgaacttcgccgtggaactcgaaggcaaggacgccttc
ggccgcgacgcggagctcgccatcgttcaggcgcctcgcgccctaccccgtctggtcccc
atgccggcagcgctcgcgccgttgccgaacagcttcgtgctgctcagctcgctcatgctg
cgttttgccagcgagctgttccccggcctcaccgccaaggcgtgccatcagtttcgggtc
acgcgaaacagcgatctgttcgtcgacgaagacgaaatcaccaatctacgcaccgcgctg
caaggcgagctccccgcgcgccacctcggtgacgccgttcggctcgaagtcgacgccggc
gcccctgcgcgcctcgtgcgccgactccagacggagtgcggactggccgactcggactgc
taccgcgtcaaagggcccgtcaatctggtgcgcctgatgccgctgccggagatggtcgac
cggccggacctgaaattcgtgccattcgttccggcattgcccaagcgcatgagcgcctca
cccgccatgttcgatctcatcgatcagggcgatctgctgttgcatcatccgtacgacagc
ttccagcccgtgctcgaactgctgctgcaagcggcgcgcgatcccgatgtcgtggccatc
aagcagaccatctaccgtaccggcaacgagtcggcgctcatggacgccctcatggaggcc
gcgcgcaacggcaaggaagtcacggtggtcgtggaactgctggcgcgcttcgacgaggag
acgaatatcaactgggcggcgcgcctcgaagcggttggcgcgcacgtcgtctatggcgtg
gtcggccacaagtgccacgcgaaaatgctgctcgttgtgcgtcgcacgcgccagggcaag
aagacgttcctcaagcgctacgtccacctcggcaccggcaactatcacccgcgcacggcg
cgtctgtacaccgactttggcctgatgaccgccgacgaagcgctgtgcgccgatgtccac
gtcgtgttccagcaactgaccggcattggtcgccagacccacctgcacggtctctggcag
tcgccgttcacgatgcattcgcacctgctcgaagcgattcgccgtgagacggaagcggcg
atggccggcaagaaggcccgcatcattgccaagatgaacgcgctgctcgagccgacgatc
attgccgagctttacaaggcgtcgcgcgccggcgtgaagatcgatctgatcgtgcggggc
gtttgcgcactgcgcgccggggtaaaaggcctgtccgagaacattaccgtgcgctcgatc
gtcggccgctttctcgaacaccatcgcatctattatttctacgcgaacggcgacgagcac
gtcatgctctccagcgccgactggatggagcgcaacttcttccgccgcgtggaagtcgcg
ttccccgtgcgagacaagcgcctgaaggcacgcgtgatacgcgaggggctgatggtgcat
ctgcgcgacaacacgctgtcatggctcatgcgggcagacggcagctacgtgcgacgcaag
gcgggcaagacgccatacaacagccagatggtgctgatgcaggaaatcacgcagcacgtg
caaacggggaactga
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