Panicum virgatum (switchgrass): 120642156
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Entry
120642156 CDS
T07260
Name
(RefSeq) oxalate--CoA ligase-like
KO
K22133
oxalate---CoA ligase [EC:
6.2.1.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00630
Glyoxylate and dicarboxylate metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120642156
Enzymes [BR:
pvir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.8 oxalate---CoA ligase
120642156
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Motif
Pfam:
AMP-binding
AMP-binding_C
GH3
Motif
Other DBs
NCBI-GeneID:
120642156
NCBI-ProteinID:
XP_039774507
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Position
7K:complement(52037317..52039274)
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AA seq
531 aa
AA seq
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MAADAPASGTLTALLKKAAAAFPARRAVSVPGKIQLTHAALDALVDAAAARLAADAGVRQ
GHVVALSFPNTIELVIMFLAVIRARAVAAPLNPAYTQDEFEFYLSDSQSRLLITNAEGNP
AAEAAAAKLGLAHAAATLKDAAGPVHLAGLGCAAAANGNANGSHKQDKNEPSDVALFLHT
SGTTSRPKGVPLTQANLAASVRNIRSVYRLTEADATVVVLPLFHVHGLLCGLLSSLASGA
SVALPAAGRFSASTFWADMRAAGATWYTAVPTIHQIILDRHASKPEASYPALRFVRSCSA
SLAPAILEKLEAAFGAPVLEAYAMTEASHLMTSNPLPEDGPRKPGSVGRPVGQELAILDE
EGARVAAGQPGEVCIRGANMTAGYKGGDPGANEAAFRFGWFHTGDIGVVDEEGYLHLVGR
IKELINRGGEKISPIEVDAVLLGHPAVAQAVSFGVPDDKYGEEINCAVIPREGSPLGEDD
VLAHCRRNLASFKVPKKVFIAGDLPKTATGKIQRRIVAQHFVVQPPKAAAA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacgctcccgcctccggtaccctcacggcgctgctcaagaaggcggccgcc
gccttcccggcccgccgcgccgtctccgtcccgggcaagatccaactcacccacgccgcc
ctcgacgcgctcgtcgacgccgcggccgcgcgcctcgccgccgacgccggggtccgccag
ggacacgtcgtcgcgctctccttccccaacaccatcgagctggtgatcatgttcctggcg
gtgatccgcgcccgcgccgtggcggcgccgctcaacccggcctacacccaggacgagttc
gagttctacctctccgactcccagtcccgcctcctcatcaccaacgccgagggcaacccc
gccgcggaggccgccgccgccaagctcggcctcgcccacgccgccgcaaccctcaaggac
gccgccggacccgtccacctcgccggcctcggctgtgcggctgccgccaacgggaacgcc
aacggctcccacaaacaagacaagaacgagccgtccgacgttgccctgttcctgcacacc
tccggcacgacgagccggcccaagggggtgccgctcacgcaggccaacctggcggcctcc
gtccgcaacatccgctccgtgtaccgcctcaccgaggcggacgccaccgtggtggtgctg
ccgctcttccacgtgcacggcctcctctgcggcctcctcagctcgctggcctccggcgcc
tccgtggcgctcccggccgccggccgcttctccgcgtccaccttctgggccgacatgcgc
gcggcgggcgccacctggtacaccgccgtgcccaccatccaccagatcatcctggaccgc
cacgcctccaagcccgaggcgtcctacccggcgctccgcttcgtccgcagctgcagcgcg
tcgctggcgccggcgatcctggagaagctggaggcggcgttcggggcgccggtgctggag
gcgtacgccatgacggaggcgtcgcacctgatgacgtccaacccgctgccggaggacggg
ccgcggaagcccggctcggtggggcgccccgtggggcaggagctggccatcctggacgag
gagggcgcgcgggtggcggcggggcagcccggcgaggtgtgcatccgcggcgccaacatg
acggcgggctacaagggcggcgacccgggggcgaacgaggcggcgttccggttcgggtgg
ttccacacgggcgacatcggcgtggtggacgaggaggggtacctgcacctggtggggcgc
atcaaggagctcatcaaccgcggcggcgagaagatctcgcccatcgaggtggacgccgtg
ctgctgggccaccccgccgtcgcgcaggcggtgtccttcggcgtgcccgacgacaagtac
ggcgaggagatcaactgcgcggtcatcccccgcgaggggtcgccgctgggggaggacgac
gtgctggcgcactgccgcaggaacctggcgtccttcaaggtgcccaagaaggtgttcatc
gccggcgacctccccaagacggccaccggcaagatccagcgccgcatcgtcgcgcagcac
ttcgtcgtgcagccgcccaaggccgccgccgcctga
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