Panicum virgatum (switchgrass): 120643495
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Entry
120643495 CDS
T07260
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial-like
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00280
Valine, leucine and isoleucine degradation
pvir00650
Butanoate metabolism
pvir01100
Metabolic pathways
pvir04146
Peroxisome
Module
pvir_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
120643495
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
120643495
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120643495
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
120643495
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GFIT
Motif
Pfam:
HMGL-like
TGT
Motif
Other DBs
NCBI-GeneID:
120643495
NCBI-ProteinID:
XP_039775807
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Position
8K:2412577..2415456
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AA seq
387 aa
AA seq
DB search
MSSLEEPLGLGDLPKLSINRLGSFSQPSAYRRAAADDRNTRKYNNSCNGGAPMVFHANSH
AWHQQCRQADSSCHVVELRDLPRKVMWDLPSFVKIVEVGPRDGLQNEKGNVPTSVKIQLI
HKLVAAGLSVVEATSFVSPKWVPQLADAKEVLKGIQQMPNVRYPVLTPNLRGFEAAVAAG
AKEIAVFASASESFSKSNINCTIEESLVRYRDVTAAAKKHGLLIRGYVSCVIGCPVEGAI
DPSKVAYVAKELYNMGCSEISLGDTIGVGTPGSVVAMLEAVMSFVPVDKIAVHFHDTYGQ
ALANILVSLQMGISIVDSSVSGLGGCPYAKGATGNVATEDVVYMLHGLGIETNVDLNKLM
EAGNYISKHLGRPLGSKTAAALRKLTT
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcctcgaggagccgcttggtcttggagacctgccgaagttgagtattaacaga
cttggaagcttctcccagccaagtgcttatcgcagggcagcggctgatgaccgcaacact
cgcaagtacaacaactcctgcaatggtggcgcgccgatggttttccatgccaattctcat
gcgtggcatcagcaatgccgtcaggccgattcgtcatgtcatgtggtggagcttagagat
ctccctcggaaggttatgtgggatctaccaagctttgtgaagattgttgaagttggaccc
cgagacggcctgcaaaacgaaaagggcaatgtaccgacatctgtaaagatacaactgata
cacaaattagtggctgcaggtttatcagtagttgaagccacaagttttgtatccccaaaa
tgggtgccgcagctagctgatgcaaaggaagtcctcaaaggaatccagcagatgccaaat
gtgcggtatcctgtgttaactcctaacctaagaggatttgaggctgctgttgcagctggt
gcaaaggaaattgcggtttttgcatctgcctctgaatccttctctaagtcgaacatcaac
tgtaccatagaggaaagccttgttcggtaccgtgatgttactgctgctgccaagaaacat
ggactccttatccgtgggtatgtttcgtgtgtgattggttgccctgttgaaggtgcaatc
gatccatcaaaggtggcatatgtagctaaggagctttataacatgggctgctcagagatt
tcacttggcgatactattggtgttggtacaccaggtagtgtagttgctatgcttgaagct
gtcatgtcctttgttccagtggacaagattgccgttcatttccatgatacatacggccag
gcccttgccaatatcctagtatcccttcaaatggggatcagcatagtagactcctcagtt
tcaggccttggaggctgcccatatgcaaagggcgccactggcaatgtcgccactgaggat
gtcgtgtacatgctccatggcctaggcatagagaccaacgtggacctcaacaagctcatg
gaggctggcaattacatctccaagcatctaggaaggccactgggctccaagactgctgcc
gctctgcgcaagctaaccacctga
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