Panicum virgatum (switchgrass): 120644455
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Entry
120644455 CDS
T07260
Name
(RefSeq) long chain base biosynthesis protein 2a-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00600
Sphingolipid metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120644455
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120644455
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
120644455
Amino acid related enzymes [BR:
pvir01007
]
Aminotransferase (transaminase)
Class II
120644455
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GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
FmdE
COA2
Motif
Other DBs
NCBI-GeneID:
120644455
NCBI-ProteinID:
XP_039777019
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Position
8K:complement(33639631..33643673)
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AA seq
488 aa
AA seq
DB search
MVRLPYTTALTTLFSYGLLFAFGQLRDFFRKLIDWFKAKNVKGYAPICLGLEDFYVRRLY
LRIQDCFGRPIASAPDSWFDVVERTSNDNNKTLQRTSNTSRCLNLGSYNYLGFAAADEYC
TLHVIESLKKYSASTCSVRVDGGTTKLHTELEELVARFVGKPAAILFGMGYVTNSAIIPC
LIGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNSPAHLEEVLREQIAGGQPRTHRPWK
KIIVIVEGIYSMEGELCKLPEIIAVCKKYKAYTYLDEAHSIGAVGQSGRGVCELLGVDPA
DVDIMMGTFTKSFGSCGGYIAASKEIIQHLKHSCPAHLYATSMSPPAVQQVISAIKVILG
EDGSNRGAQKLARIRENSNFFRSELKKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR
QKVAVVTVAFPATPLLLARARICISASHTREDLVKALDVISRVGDLVGIKYFPAEPPKIA
EAGHDKLE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggctgccgtacacgacggcgctgaccacgctgtttagctacgggctgctcttc
gcgttcggccagcttagggatttcttccgcaagctcatcgactggttcaaggccaagaac
gtcaaggggtacgcgccgatctgcctgggcctggaggatttctatgtgcgccgcctgtac
cttcggatccaggattgctttggtaggccgattgcaagcgcaccagattcatggtttgat
gttgttgagcgaacctcaaatgacaataacaagacactacagcgtacctcaaatacatct
agatgcctcaacttgggatcctacaactaccttggatttgctgcagcagatgagtactgc
acactacatgttattgagtctctcaagaaatactcagcaagcacctgcagtgtccgtgtt
gatggcggcacgaccaagcttcacaccgagctggaggagttggtcgcacgtttcgttgga
aagcctgctgctatcctatttggcatgggttatgttacaaactctgccatcattccttgc
ctaattggaaagggtgggttgataattagtgattctttgaaccataactcaattgtcaat
ggcgcaagaggatctggtgcaactgtcagggttttccagcataactcccctgctcatttg
gaagaggtactgagagagcagatagctggtggtcagccacggacacacagaccatggaag
aagataattgtcattgttgagggtatctatagcatggaaggagagctgtgtaagctccct
gagattatagctgtttgcaagaaatacaaggcttacacatatctggatgaggctcatagc
attggtgctgttgggcagtctggccggggcgtttgtgagctccttggggttgacccagct
gatgtagatataatgatgggtactttcaccaagtcttttggatcatgtggtggatacatt
gccgcatcaaaggagataattcagcacctgaagcatagttgcccagcccatctatatgct
acttccatgtcaccaccagcagtgcaacaagttatctctgctattaaagttattcttggg
gaggatggctccaacagaggtgcccaaaaacttgcacgcatccgtgagaatagtaatttc
ttcaggtcagagctcaagaagatgggtttcgaggttcttggtgacaatgactctcctgtc
atgcccataatgctatacaatccggctaagattcctgcattttctagggagtgccttagg
caaaaggttgctgttgttactgtggcattccctgcgacacctcttcttcttgcaagagct
cgtatctgcatttctgcttcacacactagggaggacctggtgaaagcccttgatgttatc
agcagagttggtgatcttgtcggcatcaaatacttccctgcagaaccaccaaagatagct
gaagctggtcatgataaactggagtag
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