Panicum virgatum (switchgrass): 120645102
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Entry
120645102 CDS
T07260
Name
(RefSeq) protein arginine N-methyltransferase 5-like isoform X1
KO
K02516
type II protein arginine methyltransferase [EC:
2.1.1.320
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120645102
03036 Chromosome and associated proteins [BR:
pvir03036
]
120645102
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.320 type II protein arginine methyltransferase
120645102
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120645102
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
PRMTs (protein arginine metyltransferases)
120645102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRMT5_TIM
PRMT5
PRMT5_C
Met_10
Methyltransf_25
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
120645102
NCBI-ProteinID:
XP_039777821
LinkDB
All DBs
Position
1K:complement(3475960..3488878)
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AA seq
681 aa
AA seq
DB search
MPLGQRAGDKSDSRYCGVEVLDFPAGEGLPAVLNHSLASSFDFILAPLVDPNYRPAPGAV
LPVSASDLVLGPAQWSNHVVGKISEWIDLDAEDEQLRLDSELTLKQEIAWASHLSLQACV
LPAPRRSCGNYARVVNQILQGLTNMHLWLRLPLEKSEPMDDDLDKVKNNNHMNEMVDSWE
LWNSFRLLCDHSSQLCVALDISSTLPSINSLGRWFGEPVRAAILQTNAFLTNGRGYPCLS
KRHQKLLTGFFNHYIQVILSGRSNHNVPPVSEGVLLGDENHTEDAPVRHALSPYLDYTAY
LYRRMDPLPEQECFEINYRDFLQSPLQPLMDNLEAQTYETFEKDVVKYTQYQRAVAKALV
DRVPDDAVSTTRTVLMVVGAGRGPLVRVSLQAAEQTGRKLKVYAVEKNPNAVITLHSLIK
LEGWESLVTVISSDMRCWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKPDGISIP
SSYWTFSYTYLSLIPDVQNIFDIIDCLLMVLCRYTSFIQPITASKLHNDIKAHKDIAHFE
TAYVVKLHRIATLTPPQQVFTFTHPNFSPNASNQRYTKLQFEMPPDMGSCLVHGFAGYFD
SVLYKDVHLGIEPNTATPNMFSWFPIFFPLRKPIYVPDRSPIEVHFWRCCAPTKVWYEWA
VTTPTPSPIHNSSGRSYWVGL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcctctggggcagcgcgcaggggacaagagcgattcccgctactgcggggtggaggtg
ctcgacttccccgccggcgagggcctccccgccgtcctcaatcactccctcgcctcctcc
ttcgacttcatcctcgccccgctggtcgaccccaactaccggcccgcgcccggcgccgtg
ctgcccgtgtcggcgtcggacctcgtcctcggcccggcccagtggagcaaccacgtcgtc
gggaagatcagcgagtggatcgatttggacgcggaggacgagcagctccggttggactcc
gagctcacgctgaagcaggagatcgcttgggcatctcacctctcgctgcaggcatgcgtt
cttcctgcccccagaagatcttgtggcaattatgctagagttgtgaatcaaattttgcaa
ggcctgaccaacatgcatttgtggcttaggctacctttggagaagtcggagccaatggat
gatgaccttgataaagtaaagaataacaaccatatgaatgaaatggtagactcatgggaa
ttgtggaattcattcagactgctatgtgatcatagtagccaactatgtgtggcacttgat
atttcgagcacactgccatcaataaactcattaggccggtggtttggggagcctgtaagg
gcagctattctacaaaccaatgcttttctaacaaatggaagagggtatccttgtttgtca
aagcggcatcagaagctgctaactggattttttaaccattatattcaggtaatactctct
gggagatcaaatcacaatgttcccccagtatctgaaggagtgctcttaggtgatgagaac
cacactgaagatgcccctgttcgacatgcattaagtccatacctggactacactgcatac
ctataccggaggatggatccacttcctgagcaggaatgctttgagatcaattacagggat
tttttgcagtcccctctccagcctctaatggataatttggaagctcagacttatgagaca
tttgagaaggatgttgtgaagtacactcagtatcaaagagcagttgctaaggctttggtt
gatagggtcccagatgatgcggtctccacaactaggacggtgctgatggttgttggagca
ggccgaggacctctagtacgagtatcattgcaggctgctgaacaaactggtcgcaagtta
aaagtatatgctgtggaaaaaaatcctaatgctgtcattactcttcatagtttgatcaaa
ttggaggggtgggaaagcttggttactgtaatttctagcgacatgaggtgctgggatgcc
cctgaaaaagcagatattttggtcagtgaattgcttgggtcctttggtgacaatgagtta
tctcctgagtgtctggatggtgctcagcgattcttgaagcctgatgggatttctattcct
tcttcgtactggaccttttcttatacatatctttccttaattcccgatgtccaaaatata
tttgatatcattgattgtttgcttatggttctttgcagatacactagttttatccaacca
ataacagcatcaaagttgcacaatgatatcaaagcacacaaagatattgcacattttgaa
actgcatatgttgtcaaactacaccgcatagcgacactgacacctccacaacaggtattt
actttcacccatccaaatttctcaccaaacgcgagcaatcaaaggtataccaagttgcaa
tttgaaatgccaccagatatggggtcatgccttgtgcacggatttgctggatattttgac
tctgttctatataaggatgttcatcttggaattgagccaaacactgctacaccaaacatg
tttagctggttcccgatcttcttcccgttgagaaagcccatctacgtgcccgaccgatct
cctatagaagtgcacttctggcggtgctgtgcccccacaaaggtgtggtacgagtgggct
gtgacgacaccgactccgtcacccatccataacagcagtggccggtcatattgggttggt
ctataa
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