Panicum virgatum (switchgrass): 120646073
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Entry
120646073 CDS
T07260
Name
(RefSeq) very-long-chain aldehyde decarbonylase GL1-6-like
KO
K15404
aldehyde decarbonylase [EC:
4.1.99.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00073
Cutin, suberine and wax biosynthesis
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00073 Cutin, suberine and wax biosynthesis
120646073
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.5 aldehyde oxygenase (deformylating)
120646073
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Gene cluster
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Motif
Pfam:
CER1-like_C
FA_hydroxylase
Motif
Other DBs
NCBI-GeneID:
120646073
NCBI-ProteinID:
XP_039778729
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All DBs
Position
1K:complement(55449651..55453378)
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AA seq
627 aa
AA seq
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MATRPGPLSRWPWQDLGNYKYAVVAPWAARSTYRFLTASGSDDQRRDLLGFAVLPVLLLR
LLYSQVWISVSRHQTARSKHRIVSKSLDFEQVDRERSWDDQILLTALLFYVVNAAAPAAQ
GLPWWNSKGLVVAALLHAGPVEFLYYWLHRALHHHYLYARYHSHHHASIVTEPITSVIHP
FAEEVVYFALFAIPLLTMVATGTGSVVVANGYLIYIDFMNYLGHCNFELVPKMLFDVLPP
LKYLMYTPSFHSLHHTQFRTNYSLFMPLYDYLYGTLDKSSDDLYERTLHGREEAPDVVHL
THLTTPDSVLHLRLGFASLAAAPLAAPFATRLRLRAAAPLAKLTSLLGSTFRAEANRLHN
LNIETWVVPRYTSQYLSKDGLYSIGRLIEKAVADAEASGARVLTLGLLNQANELNRNGEL
YVIRKPNLKTKIVDGTSLAVAAVVHMIPPGTKDVLLLGDANKVATVLASALCEREILVQM
VDKDLYDCLTQELRPELHKHLLVSSSYTSKVWLVGDKLRDQEQRKAQAGVHLVPYSQFPP
NAMREDCVYHSTPALVVPDLFENLHACENWLPRRVMSAWRAAGIVHALEKWDAHECGARV
TGVDKAWRAALAHGFRPYDRHGAAVAK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggccacgagacctggccccctcagccgctggccatggcaagatcttggaaactacaag
tacgcggtggtggctccatgggcggcgcgcagcacgtacaggttcttgacggcgagcggc
agcgatgaccagaggagggacctgctcggcttcgccgtgctgccggtgctcctcctccgc
ctcctctacagccaggtgtggatcagcgtctcccgccaccagacggcgaggagcaagcac
cggatcgtgagcaagagcctggacttcgagcaggtggaccgggagaggagctgggacgac
cagatcctcctgacggcgctgctcttctacgtggtgaacgcggcggcgccggcggcgcag
gggctgccgtggtggaactccaagggcctggtggtggcggcgctgctgcacgcggggcca
gtggagttcctctactactggctccaccgcgcgctgcaccaccactacctgtacgcccgg
taccactcgcaccaccacgcgtccatcgtgacggagcccatcacctccgtcatccacccc
ttcgcggaggaggtggtctacttcgccctcttcgccatcccgctgctcaccatggtggcc
accggcaccggctccgtcgtggtggccaacggatacctcatctacatcgacttcatgaac
tacctcggccactgcaacttcgagctcgtccccaagatgctcttcgacgtcttgcctcca
ctcaagtacctcatgtacacgccatcgttccactctctgcaccacacgcagttccgcacc
aactactccctcttcatgccgctctacgactacctgtacgggacgctggacaagtcgagc
gacgacctgtacgagcgcacgctgcacggccgggaggaggcgcccgacgtcgtccacctc
acgcacctcaccacgccggactccgtcctccacctccgcctcggcttcgcctccctcgcc
gctgcgccgctcgccgcccccttcgccaccaggctgcgcctccgagcggcggccccgctg
gccaagctcacctcgctcctcgggagcaccttcagggccgaggccaacaggctccacaac
ctcaacatcgagacatgggtcgtcccaagatacacatcccagtatttgtcgaaggatggt
ttgtattcgatcgggcgcttgattgagaaggccgtggccgatgcagaagcaagtggcgcc
agggtgctaacgctcggtctactgaatcaggcgaacgagttgaaccggaacggagagcta
tatgtcatcaggaaacctaacctgaagaccaagatcgtcgatgggaccagcttggccgtc
gccgccgtggtccacatgatccctccaggcacgaaggacgtgctcctcctgggagacgcg
aacaaggtcgccaccgtgttggcttcggctctctgcgaacgggaaattctggttcagatg
gtggacaaggatctgtatgactgcctgacgcaggagctgcgcccagagctgcacaagcac
ctgcttgtttctagcagttacaccagcaaggtgtggcttgttggtgacaagctgagggat
caagagcagaggaaggcccaggccggcgtccacttggtgccctactcacagttccctccc
aacgcgatgcgcgaggactgcgtctaccacagcacccccgcgctggtggtgccggacttg
ttcgagaacctccatgcctgcgagaactggctgccgcggagggtgatgagcgcgtggcgc
gcggcgggcatcgtgcacgcgctggagaagtgggacgcgcacgagtgcggcgccagggtc
accggcgtcgacaaggcctggcgcgccgcgctggcccacggcttccgcccctacgaccgc
catggcgccgccgtcgccaagtga
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