Panicum virgatum (switchgrass): 120649457
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Entry
120649457 CDS
T07260
Name
(RefSeq) indole-3-glycerol phosphate lyase, chloroplastic-like isoform X1
KO
K13222
indole-3-glycerol-phosphate lyase [EC:
4.1.2.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00402
Benzoxazinoid biosynthesis
pvir00999
Biosynthesis of various plant secondary metabolites
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00402 Benzoxazinoid biosynthesis
120649457
00999 Biosynthesis of various plant secondary metabolites
120649457
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.8 indole-3-glycerol-phosphate lyase
120649457
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Motif
Pfam:
Trp_syntA
His_biosynth
PcrB
FMN_dh
ThiG
BtpA
IGPS
NMO
Ribul_P_3_epim
NanE
PEP_mutase
TMP-TENI
ALF
Motif
Other DBs
NCBI-GeneID:
120649457
NCBI-ProteinID:
XP_039782185
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Position
9K:4006859..4026178
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AA seq
334 aa
AA seq
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MAFTIKIKAALTSNSTFSPAVHQSSSLTTPAASVVKMPAGRRKAAVIIRAVAAVAPPPAP
TPAKPAGKRCLLVSQTMSRLKAQRKTAFIPYITAGDPDLATTAEALRLLDACAADVIELG
MPFSDPYADGPVIQASAARALASGTTTDSVLAMLKEVTPELSCPVVLFSYFNPIVRRGLA
DFAAAAKEAGVDGLIVPDLAYDSTCSLRSEAIKNNLELVLLTTPATPEERTKEITRASEG
FVYLVSVNGVTGPRANVSTRVESLIREVKKVTDKPVVVGFGISKPEHVKQIAEWGADGVI
IGSAMVRQLGEATSPQEGLKRLEDYARSMKNALP
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggctttcacgatcaagatcaaagctgcgttgacctccaactcgacattttccccggca
gttcaccagtcatcgtcactcacgacgccggcggcgtcggttgtgaagatgccagctggg
cggaggaaggctgcggtgatcatcagggcggtcgccgcggtggctccgccgcctgccccg
acgccggccaaaccagcgggcaagcggtgcctgttggtgtcgcagaccatgtccaggctc
aaggcgcagcgcaagacggcgttcatcccgtacatcaccgctggcgaccccgacctggcc
acgacggcggaggcgttgcggctcctggacgcctgcgccgccgatgtcatcgagcttggc
atgcccttctccgacccttacgctgatgggcctgtcatccaggcatcagcggcgcgggcg
ctggcgagtggcacgacgacggacagtgtgctggcgatgctcaaggaggtgacgccggag
ctgtcgtgcccggtggtactcttctcctacttcaaccccatcgtccggcgggggctggcc
gacttcgccgccgccgccaaagaagccggtgtagacggtctgatagtccccgacctcgct
tatgattccacgtgttccctcaggagtgaagccataaagaacaacctcgagctggtgcta
ctcacaacaccagctacgcctgaagagaggacgaaggaaatcacaagagcttcagaaggt
tttgtttaccttgtgagcgtcaatggagttacaggtccccgtgcaaatgtgagcacacgt
gtcgaatctctcattcgagaggttaaaaaggtcactgacaaacctgtagttgttggattt
ggcatatcgaaacctgagcacgtaaagcagattgcggagtggggtgctgatggggtgata
attggcagtgcaatggtgagacagttgggcgaggcaacatctccgcaagaagggttgaaa
cggctagaggattacgcccggagcatgaagaacgcattgccatga
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