Panicum virgatum (switchgrass): 120649459
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Entry
120649459 CDS
T07260
Name
(RefSeq) tryptophan synthase alpha chain, chloroplastic-like
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00260
Glycine, serine and threonine metabolism
pvir00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
Module
pvir_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120649459
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
120649459
Enzymes [BR:
pvir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
120649459
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GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
BtpA
ThiG
PcrB
FMN_dh
NanE
TMP-TENI
IGPS
Motif
Other DBs
NCBI-GeneID:
120649459
NCBI-ProteinID:
XP_039782190
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Position
9K:4063438..4066222
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AA seq
276 aa
AA seq
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MADHGVVAGKRTVAGTFSRLREQVKTAFIPFITAGDPDLATTSKALKILDSCGSDVIEVG
VPYSDPLADGPVIQASATRALKKGTTLESVIGMLKGVAPELSCPIVLFTYYNPILKRGVR
NFMATIRQAGINGLVVPDLPLEETVLLRSEAIMHSIELVLLTTPTTPTERMIEIVKASEG
FLYLVSAVGVTGARSNVNLRVEHLLREIKKVTDKPVAVGFGVSTPEHVKQIAGWGADGVI
IGSAIVRQLCEAATPEEGLKRLEEYTRNITAAMPLR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccatggcgtggtcgccggcaagcgcaccgtcgcggggactttctccaggctc
agggagcaggtcaagactgcatttatcccattcatcactgcgggtgatcctgacttggca
accacatcgaaagcattgaagatcctcgattcctgcggttcagatgtgattgaggttggc
gtaccatactcggatccgctggctgatgggccggttattcaggcatctgcaacacgtgca
cttaagaaaggcactaccctagaatctgtcatagggatgctgaaaggggttgcacctgag
ttgtcttgtcctatagttcttttcacatactacaacccaattctgaagcgtggggtgcga
aacttcatggctactatcagacaagctggcataaatggacttgtagtacctgatcttcct
ttggaggagacagtgttgctgaggagcgaggccattatgcacagcatagagctggtgctg
cttacaacgccaaccacgccaacagagaggatgatagaaattgtaaaagcttcagaagga
tttctttatcttgtgagtgctgttggagttacaggtgcacgctcaaatgtaaacttacgt
gtggaacatcttcttagggagattaagaaggttacagacaaacctgtagctgttggcttt
ggtgtatcaactccagagcatgtaaaacagatcgcaggctggggagcagatggtgtgatt
attgggagtgcaattgttagacagttatgtgaagctgctactcctgaagaagggctgaaa
aggctagaggagtacaccaggaatataacagctgccatgccattgaggtga
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