Panicum virgatum (switchgrass): 120649947
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Entry
120649947 CDS
T07260
Name
(RefSeq) glutamate decarboxylase 1-like
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00250
Alanine, aspartate and glutamate metabolism
pvir00410
beta-Alanine metabolism
pvir00430
Taurine and hypotaurine metabolism
pvir00650
Butanoate metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
120649947
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
120649947
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
120649947
00430 Taurine and hypotaurine metabolism
120649947
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
120649947
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
ELYS
Motif
Other DBs
NCBI-GeneID:
120649947
NCBI-ProteinID:
XP_039782821
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Position
9K:complement(9329473..9336312)
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AA seq
494 aa
AA seq
DB search
MVLSHGVGGGSDESVHSTFASRYVRASLPRFRMPEQSIPKEAAYQIINDELMLDGNPRLN
LASFVTTWMEPECDKLIQASLNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSETAV
GVGTVGSSEAIMLAGLAFKRRWQNKMRAAGKPCDKPNIVTGANVQVCWEKFARYFEVELK
EVKLSEGYYVMDPHKAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLTQKNAETGWDT
PIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWCIWRSKEDLPEE
LIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYKNIMENCQENAMVLKQGLE
KTGRFNIVSKDTGVPLVAFSLKDSSRHNEFEISDFLRRFGWIVPAYTMPPDAQHVTVLRV
VIREDFSRTFAERLVLDIEKVLHELDALPARAPSGDLAALAAAEASQREMDKQREVISLW
KRAVLAKKKINGVC
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcccacggcgtcggcggcggctccgatgagtcggtgcactcgacgttcgcg
tcccgctacgtccgcgcctccctccccaggttccggatgccggagcagtcgatcccgaag
gaggcggcgtaccagatcatcaacgacgagctgatgctggacgggaacccgcggctgaac
ctggcgtccttcgtcaccacgtggatggagcccgagtgcgacaagctcatccaggcctcc
ctcaacaagaactacgtcgacatggacgagtaccccgtcaccaccgagctccagaatcgg
tgcgtgaacatgatcgcccatctgttcaacgcccctctcggcgattctgaaactgccgtc
ggggtcggcaccgtcggctcgtccgaggccatcatgctcgccgggctggcgttcaagagg
cgttggcagaacaagatgagggccgccggcaagccctgcgacaagcctaacatcgtcacc
ggcgccaacgtccaagtctgctgggagaagttcgcgcgttatttcgaggtggagctcaag
gaggtgaagctgagcgaggggtactacgtcatggacccgcacaaggccgtggacatggtg
gacgagaacaccatctgcgtcgccgccatcctcggctccacgctcaacggcgagttcgag
gacgtgaagctgctcaacgacctgctcacccagaagaacgccgagacaggctgggacacg
ccgatccacgtggacgcggcgagcggcgggttcatcgcgccgttcctgtacccggagctg
gagtgggacttccgtctgccgctggtgaagagcatcaacgtcagcgggcacaagtacggc
ctcgtctacgccggcatcggatggtgcatctggaggagcaaggaggacctgccggaagag
ctcatcttccacatcaactacctgggcgccgaccagcccaccttcaccctcaacttctcc
aaaggttccagccaagtcatcgcacagtactaccagctgatccgccttggctttgagggt
tacaagaacatcatggagaactgccaggagaacgcgatggtgctgaagcagggcctggag
aagacggggcggttcaacatcgtgtccaaggacaccggcgtgccgctggtggccttctcc
ctcaaggacagcagccggcacaacgagttcgagatctccgacttcctgcgccgcttcggg
tggatcgtgccggcctacaccatgccccccgacgcgcagcacgtgacggtgctccgcgtg
gtcatccgcgaggacttcagccgcaccttcgccgagcgcctcgtgctcgacatcgagaag
gtgctgcacgagctggacgcgctgcccgcccgcgcccccagcggcgacctcgccgcgctc
gccgccgccgaggccagccagagggagatggacaagcagcgcgaggtcatctcgctctgg
aagagggccgtcctggccaagaagaagatcaacggcgtctgctaa
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