Panicum virgatum (switchgrass): 120650257
Help
Entry
120650257 CDS
T07260
Name
(RefSeq) ornithine aminotransferase, mitochondrial-like
KO
K00819
ornithine--oxo-acid transaminase [EC:
2.6.1.13
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00330
Arginine and proline metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00972
Proline metabolism
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
120650257
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120650257
Enzymes [BR:
pvir01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.13 ornithine aminotransferase
120650257
Amino acid related enzymes [BR:
pvir01007
]
Aminotransferase (transaminase)
Class III
120650257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
OAM_dimer
Motif
Other DBs
NCBI-GeneID:
120650257
NCBI-ProteinID:
XP_039783227
LinkDB
All DBs
Position
9K:14245355..14249880
Genome browser
AA seq
470 aa
AA seq
DB search
MAAALARRVAAAAAAVARGRGMCSAAGQAAAALSSEELMRMERDCSAHNYHPIPMVFSKG
EGSHIVDPEGNKYIDFLSAYSAVNQGHCHPKVLRALIEQAERLTLSSRAFYNDKFPIFAE
FLTSMFGYDMMLPMNTGAEGVETAIKLARKWGYEKKKIPKNEALLVSCCGCFHGRTLGVI
SMSCDNDATRGFGPLVPGHLKVDFGDIDGLKKVFEEHGDRICGFLFEPIQGEAGVVIPPD
GYLKGVRDLCSKHNILMIADEIQTGIARTGKMLACDWEDIRPDMVILGKALGAGVVPVSA
VLADKGVMLCIKPGEHGSTFGGNPLASAVAVASLKVVRDEGLVERAAKLGQEFRDQLQKI
QRKFPQIIREVRGRGLLNAVDLNNDALSPASAYDICIKLKERGILAKPTHDTIIRLAPPL
SISHEELAEASKALSDVLEIDLPQMQKQIKKPESEAEKPVCDRCGRDLYG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgctggcgcggcgggtcgcggcggcggcggcggccgtggcgcgggggcgc
gggatgtgctcggcggcggggcaagccgccgcggcgctgtcctccgaggagctcatgcgg
atggagcgggactgcagcgcccacaactaccatccgatccccatggtattctccaaagga
gaaggttcacacatagtggaccctgaaggcaacaaatacattgattttctctctgcttat
tctgcagtcaatcagggtcattgccatccaaaagtcctgagagctttaatagaacaggca
gaaaggcttacactcagttctagagctttctacaatgataaattcccaatctttgcggaa
tttctgacaagcatgtttggatatgacatgatgttaccgatgaatactggagctgaagga
gttgaaactgctatcaagttggctaggaaatggggttatgagaagaaaaagataccaaag
aatgaggctttgcttgtctcttgctgtgggtgtttccatggtcgaactcttggtgtcatt
tccatgagctgtgacaatgatgcaactcgtggttttggtcctttggttcctggccatctt
aaagttgattttggagatattgatgggttaaaaaaagtttttgaagagcatggagatcgg
atttgtggttttttgttcgaacctatccaaggtgaagccggggtagtaatcccaccagat
ggctatctgaaaggtgtcagagatttgtgttctaagcacaacattttgatgattgctgat
gagatccaaacaggcatagctagaacaggcaaaatgctggcatgtgattgggaagacata
cgacctgacatggtgattctaggcaaagcacttggtgctggagttgtcccagtcagtgca
gttcttgcagacaagggcgtcatgctctgtatcaaaccaggggaacatggaagtacattt
ggtggtaatccgttggctagtgctgtggcagttgcatcactgaaagtggtgagagacgaa
ggtcttgttgaaagggctgcaaagttaggacaagagttcagggaccagctacagaagatc
cagcggaaattccctcaaatcataagagaagtgcgcggaaggggtttgctgaatgcagtg
gacttaaacaatgatgcgctgtctcctgcttctgcatatgacatttgcatcaagttgaag
gagagaggcattctagcaaaacccacacatgacaccataattcgattagcccctcccctt
tcaatcagtcatgaggagcttgcagaagcatcaaaggcgctcagtgatgtgctggagatt
gacttgccacagatgcagaagcagatcaagaagccagaatcagaggcagagaagccagtc
tgtgacagatgcggcagggacttgtacggatga
DBGET
integrated database retrieval system
