Panicum virgatum (switchgrass): 120650661
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Entry
120650661 CDS
T07260
Name
(RefSeq) alpha-galactosidase-like
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00052
Galactose metabolism
pvir00561
Glycerolipid metabolism
pvir00600
Sphingolipid metabolism
pvir00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
120650661
09103 Lipid metabolism
00561 Glycerolipid metabolism
120650661
00600 Sphingolipid metabolism
120650661
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
120650661
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
120650661
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Motif
Pfam:
Melibiase_2
Melibiase_C
Melibiase_2_C
Melibiase
Glyco_hydro_97
Motif
Other DBs
NCBI-GeneID:
120650661
NCBI-ProteinID:
XP_039783797
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Position
9K:complement(20188871..20195470)
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AA seq
427 aa
AA seq
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MARGPSTPSLLLALLVAAAAVAASEASGAPAAVGNWTEELRGAGRRGRHGRGYVWRSRSR
SRRRTFENGLGRTPQMGWNSWNHFGCGINEDLIKQTADALVNTGLAKLGYEYVNIDDCWA
ESDRDYQGNFVANRQTFPSGIKALADYVHAKGLKLGIYSDAGTRTCSKKMPGSLDHEEQD
VKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKNIFFSLCEWGRENPATWAGS
MGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMSEVEYRSHFS
IWALAKAPLLIGCDVRSMSQQTKDILTNWEVIAVNQDSLGVQGKKVQSNNGLEVWAGPLN
NNRKAVVLWNRQGYQATITAQWSSIGLASSTAVTARDLWAHSSFSAQGQLSASVAPHDCK
MYVLTPK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcggcccgagcaccccgtcgctgctgctggcgctcctcgtggcggcggcggcc
gtggccgcgtccgaggcgtccggggcccccgccgccgttggcaactggacggaggagctg
cgcggggccgggaggcggggccggcacgggcgcgggtacgtgtggcgctcgcggtcgcgg
tcgcggcggcgcacgttcgagaacggcctcggccggacgccgcagatggggtggaatagc
tggaaccacttcggctgcgggatcaacgaggacctcatcaagcagacagctgatgcactg
gtcaacactggtctggcaaaactgggctacgaatatgttaatatagatgattgctgggca
gaatctgacagggactaccagggtaactttgttgcaaatagacaaaccttcccctctggc
atcaaggcactagcggattatgtgcatgcaaaagggctgaagcttggaatctacagtgat
gctgggacacggacgtgcagtaaaaaaatgccaggatcacttgatcatgaagagcaggat
gtgaaaacattttcatcttggggtattgattatctaaaatatgataactgcaatgatgct
ggcaggagtgtaatggagagatatactaaaatgagcaatgccatgaagacctatggaaag
aacatcttcttctcgttgtgtgaatggggaagagaaaatcctgctacctgggcaggcagc
atgggcaacagctggagaacaactgatgatattgctgacaactggggcagcatgacatct
cgtgcagaccagaatgacagatgggcttcctatgctggacctggtggatggaacgatcct
gacatgcttgaagtgggcaacggtggtatgtctgaagtggagtaccgctctcacttcagc
atctgggcacttgccaaggctcctcttctgatcgggtgcgatgtacgctcgatgagccag
cagacaaaggacatactcaccaactgggaagtcattgctgtcaaccaagatagtctaggc
gtccaaggaaagaaagtgcaatccaacaatggcttagaggtatgggctgggccgctcaac
aacaacaggaaggctgtggttctctggaaccggcagggctaccaggcaaccatcaccgcc
caatggtcaagcatcgggctcgcttcatccactgctgtcactgctcgcgatctatgggcg
cattcgtcgttctcagctcagggccaattatcagcttcagtggcacctcatgactgcaag
atgtatgttctgacgccgaagtaa
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