Panicum virgatum (switchgrass): 120654419
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Entry
120654419 CDS
T07260
Name
(RefSeq) heat shock 70 kDa protein BIP1
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03060
Protein export
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
120654419
04141 Protein processing in endoplasmic reticulum
120654419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120654419
04131 Membrane trafficking [BR:
pvir04131
]
120654419
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120654419
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
120654419
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP70 / DNAK
120654419
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
120654419
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120654419
Exosomal proteins of other body fluids (saliva and urine)
120654419
Exosomal proteins of colorectal cancer cells
120654419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
FGGY_C
Radial_spoke_3
DDR
FtsA
ParM_N
Motif
Other DBs
NCBI-GeneID:
120654419
NCBI-ProteinID:
XP_039787878
LinkDB
All DBs
Position
1N:complement(1172286..1176345)
Genome browser
AA seq
665 aa
AA seq
DB search
MDRVRGSAFLLAVLLAGSLFAFSVAKEETKKLGTVIGIDLGTTYSCVGVYKNGHVEIIAN
DQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVP
YKIVNKDGKPYIQVKIKDGENKVFSPEEISAMILGKMKDTAEAYLGKKINDAVVTVPAYF
NDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSVLT
IDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKYSKDISKDNRALGKLRREAERAK
RALSNQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKSQI
HEIVLVGGSTRIPKVQQLLRDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGDETKDI
LLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSMTK
DCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLS
QEEIDRMVREAEEFAEEDKKVKEKIDARNQLETYVYNMKNTIGDKDKLADKLESEEKEKV
EEALKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIISAVYQRSGGAPGGGADGEGGVDD
DHDEL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggatcgggttcgcggatccgcgttcctgctcgccgtcctgctcgcaggatccctgttt
gcattctcagttgcaaaggaggagaccaagaagcttgggactgtgatcggtattgatctc
ggtaccacctactcctgtgtcggtgtctacaagaacggtcatgtcgagatcatcgccaat
gaccagggtaaccgtatcacaccctcatgggttgccttcaccgatagcgagaggctcatc
ggtgaggctgccaagaaccaggcagctgtcaaccctgagaggaccatctttgacgtcaag
cgtctcatcggaagaaagtttgaggacaaggaagtccagagggacatgaaacttgttccc
tacaagatcgttaacaaggatggtaagccctacattcaggtcaagataaaggatggagag
aataaggtcttcagccctgaggagatcagtgccatgattcttggcaagatgaaggatact
gctgaggcataccttggcaagaagatcaatgacgctgtcgtcactgttcctgcgtacttc
aacgatgcacagaggcaggcaaccaaggatgctggtgtcattgccggcctcaatgttgct
aggatcatcaatgagccaactgctgctgctattgcctacggtttggacaagaagggtggc
gagaagaacatccttgtctttgaccttggtggtggtactttcgatgtcagcgtcttgacc
attgacaacggtgtgtttgaggtgcttgccaccaacggtgacacccatcttggaggcgag
gactttgaccagaggatcatggagtacttcatcaagttgatcaagaagaagtacagcaag
gacatcagcaaggacaaccgtgctcttggaaagctgaggagggaagctgagcgtgccaag
agagccctcagcaaccagcaccaggtccgtgttgagattgagtccctcttcgacgggacc
gatttctcggagccgctgacccgtgccaggtttgaggagctcaacaatgatctgttccgc
aagaccatgggccctgtcaagaaggccatggaggatgctggccttgagaagagccagatc
cacgagattgtccttgttggtggaagcaccaggattccaaaggtccagcagctcctgcgg
gactactttgatggcaaggagccaaacaagggtgtgaaccctgatgaggctgttgcctac
ggtgctgcggtgcagggaagcatcttgagcggcgagggtggtgatgagaccaaagatatc
cttctccttgatgttgctcccctgacccttggtattgagactgttggaggagtcatgacc
aagttgatccccaggaacactgtcatccccaccaagaagtctcaggtgttcacgacctac
caggatcagcagacaactgtctccatccaggtctttgagggtgagcgcagcatgaccaag
gactgccgccttctcggcaagttcgacctctctggcattccaccagctcccaggggcaca
ccccagattgaggtgaccttcgaggttgatgccaacggtatcctgaacgtgaaggccgag
gacaagggcactggcaagtcagagaagatcacgatcaccaacgagaagggccgcctgagc
caggaggagattgaccgcatggtccgggaggctgaggagttcgcagaggaggacaagaag
gtgaaggagaagatcgacgcccggaaccagcttgagacgtacgtgtacaacatgaagaac
acgatcggtgacaaggacaagctggctgacaagctggagagtgaggagaaggagaaggtg
gaggaagccctcaaggaggccctcgagtggctggacgacaaccagtcggccgagaaggag
gactacgaggagaagctcaaggaggtggaggccgtgtgcaaccccatcatctcggccgtg
taccagaggtcaggcggcgccccaggtggtggcgctgatggtgagggtggcgtcgatgac
gaccatgatgagctgtag
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