Panicum virgatum (switchgrass): 120654815
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Entry
120654815 CDS
T07260
Name
(RefSeq) ribosomal RNA small subunit methyltransferase-like
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120654815
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
120654815
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120654815
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Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_31
FtsJ
Methyltransf_23
PrmA
MTS
PRMT5
PCMT
Methyltransf_32
Alpha-2-MRAP_N
Motif
Other DBs
NCBI-GeneID:
120654815
NCBI-ProteinID:
XP_039788410
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Position
1N:5737072..5738856
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AA seq
354 aa
AA seq
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MAGGKIQKKRHGAAGGARLQGGIPFEKSKGQHILRNPALVDSIVAKAGLKPTDTVVEIGP
GTGNLTKRLLEAGVKAVVAVELDPRMVLELNRRFQGHPLSSRLKVIQGDVLKCDLPYFDI
CVANIPYQISSPLTFKLLSHRPIFRCAVIMFQREFAMRLVAQPGDSLYCRLSVNVQLLSR
VSHLLKVGRNNFRPPPKVDSSVVRIEPRKPLPPVSFKEWDGLVRICFNRKNKTLGSIFKQ
KRVLELLEKNYKTMQSLQLTQDAEMGEEKMSADDVALLANMVEDLSMETGDEKEDDEMEM
DDADMAGEGAASFKEKIMGILQQGDFAEKRGSKLSQVDFLYLLSLFNKDGIHFS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggcggggggcaagatccagaagaagcgccacggcgcggcggggggcgcccgactgcag
ggcgggatcccgttcgagaagtccaaggggcagcacatactgcggaaccccgcgctggtg
gactccatcgtcgccaaggccgggctcaagcccaccgacaccgtcgtcgagattgggccg
ggcacagggaacctcaccaagcgcctgcttgaggcgggggtcaaggccgtcgtcgccgtc
gagctcgacccgcgcatggtgctcgagctcaaccgtcggttccaggggcacccgctctcc
tcgcgcctcaaggttatccaaggagatgtcctcaaatgtgatctcccatactttgacata
tgcgtggcaaacatcccgtaccagatctcatcaccccttacgttcaagcttctgtcacac
cgtccaatctttaggtgtgctgtgatcatgtttcaacgggaattcgccatgagacttgtg
gcacagcctggagatagtctctactgtcgtctctctgtgaatgtgcagctcttgtctcgg
gtgtcgcatctcctgaaggttgggaggaacaacttcaggcctccgcccaaggttgattca
tcagttgtgcgtatcgagcccaggaagcccctccctcctgtcagcttcaaggagtgggat
ggacttgtcaggatctgtttcaatcgcaagaacaagaccttgggctccatcttcaagcag
aaacgcgtccttgagttgctagagaagaactacaagactatgcagtctctccagcttact
caagatgcagaaatgggtgaggagaagatgtctgcagatgatgttgcattgctagctaat
atggttgaagatctgagcatggagactggtgatgagaaggaagatgatgagatggaaatg
gatgacgcagacatggcgggagaaggtgctgcaagcttcaaagaaaagattatgggtatt
ttgcagcagggtgattttgcagaaaagagaggttctaagctgagccaagttgatttctta
tacttgctctctctcttcaacaaagacggtatacatttctcatga
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