Panicum virgatum (switchgrass): 120656850
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Entry
120656850 CDS
T07260
Name
(RefSeq) adenosylhomocysteinase
KO
K01251
adenosylhomocysteinase [EC:
3.13.2.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00270
Cysteine and methionine metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120656850
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120656850
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120656850
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.13 Acting on carbon-sulfur bonds
3.13.2 Thioether and trialkylsulfonium hydrolases
3.13.2.1 adenosylhomocysteinase
120656850
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120656850
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120656850
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Gene cluster
GFIT
Motif
Pfam:
AdoHcyase
AdoHcyase_NAD
2-Hacid_dh_C
IlvN
TrkA_N
THF_DHG_CYH_C
NAD_binding_7
F420_oxidored
ELFV_dehydrog
Shikimate_DH
3HCDH_N
XdhC_C
Motif
Other DBs
NCBI-GeneID:
120656850
NCBI-ProteinID:
XP_039790973
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All DBs
Position
1N:56426887..56429915
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AA seq
485 aa
AA seq
DB search
MALSVEKTSSGREYKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSKPFAGARISGS
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLEEYWWC
TERCLDWGEGGGPDLIVDDGGDATLLIHEGVKAEEEYEKTGKVPDPESTDNAEFKIVLTI
IRDGIKADPKKYRKMKDRLVGVSEETTTGVKRLYQMQETGTLLFPAINVNDSVTKSKFDN
LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ
ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMHGL
ETYPGVKRITIKPQTDRWVFPETKTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
LELWKEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTKSQADYISVPIEGPYKP
AHYRY
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctccgtggagaagacctcgtcggggcgggagtacaaggtcaaggacctgtcc
caggccgacttcggccgcctcgagatcgagctggccgaggtcgagatgcccggactcatg
gcgtgccgcgccgagttcggcccatccaagcccttcgccggcgccaggatctcgggctcc
ctccacatgaccatccagaccgccgtcctcatcgagaccctcaccgcgctcggcgccgag
gtccgctggtgctcctgcaacatcttctccacgcaggaccacgccgccgccgccatcgcg
cgggactccgccgcggtcttcgcgtggaagggggagacgctcgaggagtactggtggtgc
accgagcgctgcctcgactggggcgagggcggcggccccgacctcatcgtcgacgacggt
ggcgacgccacgctcctcatccacgagggcgtcaaggccgaggaggagtacgagaagacc
ggcaaggtccccgatccggagtccaccgacaacgccgagttcaagatcgtgctcaccatc
atccgcgacgggatcaaggctgaccccaagaagtaccgcaagatgaaggataggctcgtt
ggagtctcggaggagaccactaccggagttaagaggctctaccagatgcaggagaccggc
actctcctcttccccgccatcaacgtcaacgactccgtcaccaagagcaagttcgacaac
ctgtatggttgccgccactcccttcctgatggtctgatgagggccaccgatgttatgatt
gctggcaaggttgcggtagtatgcggttatggtgatgttggcaagggctgtgctgctgcc
ctcaagcaggctggtgcccgtgtcatcgtcactgagattgatcccatctgtgcccttcaa
gccctgatggagggtcttcaggtccttaccttggaggatgtcgtttctgaagctgacatc
tttgtgaccaccactggcaacaaggacatcatcatggttgaccacatgaggaagatgaag
aacaatgcaattgtctgcaacatcggtcactttgacaatgagattgacatgcatggtctt
gagacctaccctggtgtgaaacgcatcaccatcaagcctcagacggaccgctgggtgttc
cctgagaccaagactggcatcattgtccttgctgagggtcgtctgatgaaccttggatgc
gctactggtcaccccagctttgtcatgtcctgctcattcactaaccaggtcattgctcag
cttgagctgtggaaggagaagagctctggcaagtatgagaagaaggtgtacgtgctcccc
aagcaccttgatgagaaggttgctgctctccacttgggcaagcttggtgccaagctcacc
aagctcaccaagtctcaggccgactacatcagcgtcccgattgagggtccctacaagccc
gctcactaccggtactag
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