Panicum virgatum (switchgrass): 120657621
Help
Entry
120657621 CDS
T07260
Name
(RefSeq) protein LUTEIN DEFICIENT 5, chloroplastic
KO
K15747
beta-ring hydroxylase [EC:1.14.-.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00906
Carotenoid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00372
Abscisic acid biosynthesis, beta-carotene => abscisic acid
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
120657621
09180 Brite Hierarchies
09181 Protein families: metabolism
00199 Cytochrome P450 [BR:
pvir00199
]
120657621
Cytochrome P450 [BR:
pvir00199
]
Cytochrome P450, plant type
CYP97 family
120657621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
p450
Rubella_E2
Motif
Other DBs
NCBI-GeneID:
120657621
NCBI-ProteinID:
XP_039791928
LinkDB
All DBs
Position
1N:complement(65878426..65884264)
Genome browser
AA seq
684 aa
AA seq
DB search
MPVAVLLARKAATQQQRVGAPNPTSSPASSTLIPPLPFLLPPPLVPALSMSLHHCSAATT
TPAMAAAPASAGLSSAPPFRLLGSGPSQLRLPQAAACRRRSLLRCAASGGGDGGAGSDPT
LEEQRRRQAELAARIASGEFTVQGPGWIAPLVGRLSKLGPPGELAAALLTRLAGAGAARG
GPEIPQAVGSINAVVGQAFFVPLYDLFLTYGGIFRLNFGPKSFLIVSDPAIAKHILRENS
KAYSKGILAEILEFVMGTGLIPADGEIWRVRRRAIVPALHQKFVTAMIGLFGEASDRLCQ
KLDKAASDGEDVEMESLFSRLTLDVIGKAVFNYDFDSLSYDNGIVEAVYVTLREAEMRST
SPIPTWEIPIWKDISPRQKKVNEALKLINTTLDELIAVCKRLVEQEDLQFHEEYMNEQDP
SILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKYPKVMAKLQDEVDS
VLGDGLPTIEDVKKLKYTTRVINESLRLYPQPPVLIRRSLEDDMLGGYPIGRGEDIFISV
WNLHHCPKHWDDAEVFNPERWPLEGPNPNEINQNFSYLPFGGGPRKCVGDMFATFETVVA
TAMLVKRFDFQMAPGAPPVDMTTGATIHTTEGLKMTVTRRTKPPVIPNLEMKVVSDSQEP
RLSTPTMVVSAATVASGEDQRELS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggccgtcctgctcgctcggaaggcagcaacgcaacaacaaagggtcggagca
cccaaccccacgtcctcccccgcctcctccaccctcatccccccacttcctttcctcctc
cctcctccgcttgttcccgcactttccatgtcactgcaccactgctccgccgccaccacg
acgcccgccatggccgccgccccggccagcgccggcctctcgtccgctcccccgttccgc
ctcctcggctccggcccgtcccagctccgactccctcaagctgctgcctgccgccgtcgt
tcgctactccgctgcgccgcctctggcggcggtgatggcggcgccggttccgatccgacc
cttgaggagcagaggcggcgtcaggccgagctggccgcgcgcattgcgtccggcgagttc
accgtccaaggccctggatggattgctcctctcgtggggaggctgtccaagctggggccg
ccgggggagctcgccgccgcgctgctcacgaggctggccggcgctggtgccgcgcgcggc
ggcccggagattccgcaggcggtgggatcgatcaacgcggtcgtgggccaggcgttcttc
gtccccctgtacgatctcttcctcacctacggcggcatcttccgcctcaactttgggcct
aagtcatttcttatagtatctgatccggctatagctaagcacattctgagagagaactcc
aaagcttattccaagggaattcttgcggaaatattggagtttgtcatgggtacaggtttg
atcccagctgatggggagatttggcgtgttcggaggcgtgctattgttcccgcattgcat
cagaagtttgtcactgcaatgataggtctctttggagaagcttcagatcggctctgccag
aaattggacaaggcagcatccgatggggaggatgtggagatggaatctttgttctctcga
ctaacgttagatgtcattgggaaggcagtattcaattatgactttgactcactatcttat
gacaatgggattgtcgaggcagtgtatgtaacactaagggaagcggaaatgcgtagcact
tctcctataccaacttgggaaatacccatatggaaggacatctccccaaggcagaagaag
gtcaatgaagctctcaagttgataaatactactctcgatgaactaattgccgtatgcaag
agactggtggagcaagaagatcttcagtttcacgaagaatacatgaatgagcaagatcct
agtattcttcactttctcttggcatctggagatgatgtctccagtaagcaactccgtgat
gatctaatgacaatgctcatagctggtcatgagacctctgcagcggtcttgacatggaca
ttttatcttctgtctaagtatccaaaagtaatggccaagctccaagatgaggttgatagt
gttctaggtgatggtttgccaacaattgaggatgtgaagaaactaaagtacactactcga
gtgattaatgaatcgttgagattatatccgcagccaccggttttaattcgtcggtcgctt
gaggatgatatgctgggagggtacccaataggccgtggagaagacatttttatttctgtc
tggaatcttcaccactgcccaaagcactgggatgatgcagaagttttcaacccagaaaga
tggcctttggaaggaccaaatccaaatgagataaaccaaaatttcagttacttaccattt
ggtggtggaccaaggaaatgtgttggtgacatgtttgccacttttgagactgtggtcgca
acagcaatgcttgtcaagcgatttgactttcagatggctccaggagcacctccggttgat
atgacaactggagcaacaattcacacaactgaggggttgaaaatgactgttactcggagg
acaaagccaccagtaattccaaacctggagatgaaagttgtttctgattcacaagaaccc
agactttctactccaacaatggttgttagtgctgctactgttgcttcgggagaagatcaa
agggaactctcctga
DBGET
integrated database retrieval system
