Panicum virgatum (switchgrass): 120659545
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Entry
120659545 CDS
T07260
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1B
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00270
Cysteine and methionine metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120659545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120659545
03032 DNA replication proteins [BR:
pvir03032
]
120659545
03036 Chromosome and associated proteins [BR:
pvir03036
]
120659545
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pvir02048
]
120659545
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
120659545
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
120659545
DNA replication proteins [BR:
pvir03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
120659545
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120659545
Prokaryotic defense system [BR:
pvir02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
120659545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
XAP5
Motif
Other DBs
NCBI-GeneID:
120659545
NCBI-ProteinID:
XP_039793655
LinkDB
All DBs
Position
2N:complement(6517657..6529677)
Genome browser
AA seq
1542 aa
AA seq
DB search
MVKTPRSPVTTGTRRCRAKPQMKEEKSIENSKLQNGSQDTTQEVHHGVENGDGHVTRKRP
RRAAACSDFKEKSIRLSEKTSVVKVKKNRMEEEEIDAVNLTKLGPEDPPPCRKLIDFILH
DAEGNPQPFEMSEIDDFFITALIMPMDDDLEKERERGVRCEGFGRIEDWNISGYDEGTPV
VWVSTDVADYECVKPASNYKSYFDHFYEKAQVCVEVFKKLTRSAGGNPDQGLDELLASVV
RSINAMKGYSGTMSKDLVISIGEFVYNQLVGLDGTSGNDDEKFATLPVLLALRDQCKSRV
ELTKMPSNISNSSLKIKDTECEEIAEDDDAKLARLLQQEEEWKMMKKQRGRRGTPSQKNV
YIKISEAEIANDYPLPAYYKPANQEMDEYIFDSDDSIFSDDVPVRILNNWALYNADSRLI
SLELIPMKSGAENDVVVFGSGFMRDDDGSCCSTAESAKSSSSSSKADQSDAGVPIYLSPI
KEWLIEFGGSMICITIRTDVAWYKLRQPTKQYAPWCEPVLKTARLAVSIITLLKEQSRAS
KLSFADVIKKVSEFDKGDPAFISSNIALVERYIVVHGQIILQQFADFPDETIRRSAFVSG
LLLKMEQRRHTKLVMKKKTQVMRGENLNPSAAMGPASRRKVMRATTTRLINRIWSDYYAH
HFPEDTKVGDGNETKEVDDEQEENEDEDAEDEVQIEEEKISKTPLSTRSRKLLSQSCKEI
RWEGEISGKTSSGEALYKCAYVRELRISVGGTVALEDDSGETVICFIEYMFQKNGGAKMV
HGRMLQKGSQTILGNAANEREVFLTNDCLEFKLDDIKELVTVDIQSRPWGHTYRKENSEA
DKVEQAKAEEREKKGLPMEYFCKSLYWPEKGAFFTLPHDKMGLGSGVCSSCDHIEPDSDE
LKVLSKTSFIYGKVTYNVNDFLYMRPDFFSQDEDRATFKAGRNVGLKPYAVCQLLAVPEG
AGSKKLDPASTKISARRFYRPDDISSAKAYASDIREVYYSEDIIDVPVDMIEGKCEVRKK
NDLPSSDLPVMFEHVFFCELIYDRATGALKQLPPNVKFMSMVQKTTGALKKNKGKQICET
DQVDSGKWVDVPKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFSKNHP
EAVVFVNNCNVILKAIMDKCGDTDDCISTSEAAEQAAKLAEENISNLPVPGEVEFINGGP
PCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAV
ASLLEMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPGETLPDWPEPMHVFASPELKITLP
DGQYYAAARSTAGGAPFRAITVRDTIGDLPKVENGASKLTLEYGGEPVSWFQKKIRGNMM
TLNDHISKEMNELNLIRCQHIPKRPGCDWHDLPDEKVKLSNGQMADLIPWCLPNTAKRHN
QWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDRYEFAGN
IQSKHRQIGNAVPPPLAYALGRKLKEAVDAKCQEAGVAAAAP
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaactccacgatctcctgttaccacagggacaagaaggtgcagagcaaagccg
caaatgaaggaagagaaatccattgaaaacagcaaactgcagaatggatctcaggataca
acacaagaggtgcaccatggagtcgaaaacggtgatgggcatgttacccgcaagagaccg
aggagagcagcagcctgttctgatttcaaagagaaatccatacgcttatctgaaaaaaca
tctgttgtcaaggtcaagaagaatcgtatggaggaggaagaaatagatgctgtcaatctg
acaaaacttggaccagaagatccaccaccttgccggaagttgattgatttcatcttgcat
gatgcagaagggaatccacaaccctttgaaatgtcagaaattgatgacttcttcataaca
gctcttatcatgcccatggatgatgatctagaaaaagagcgtgaaagaggagtacgctgt
gaaggatttggtcgaattgaggactggaatatttctggttatgatgaaggtactcctgta
gtctgggtgtcaacagatgttgctgactatgaatgtgtgaaaccagcaagcaattacaaa
tcttattttgaccacttctatgaaaaggctcaggtgtgtgttgaagttttcaaaaagctt
acaagatcagctggtgggaatcctgaccagggtctggatgaattacttgccagtgttgtt
cgttcaattaatgccatgaaaggatatagtgggaccatgagcaaagatttggtgatctcc
attggggaatttgtatacaatcaacttgtcggattggatggtacatcaggcaatgatgat
gaaaagtttgctaccctgccagttcttcttgctcttagagatcagtgcaaatcgagggtg
gaattgaccaagatgccatccaacatctcgaattcaagtctgaaaattaaggacacagag
tgtgaagagatagcagaagatgatgatgcaaaattagctaggttactgcaacaagaagaa
gaatggaaaatgatgaagaaacagaggggtagacgtggaacaccatcccagaaaaatgtc
tacatcaaaattagtgaagctgagattgccaatgactatcctcttcctgcatattataaa
ccagctaaccaagaaatggatgaatacatatttgatagtgatgacagcatattttctgat
gatgtgccagtgaggattctcaataactgggctctgtacaatgcagattccaggcttata
tctttggaattaatccctatgaagtcaggagcagaaaatgatgtagttgtctttgggtct
ggtttcatgagagatgatgatggcagttgctgttctacagctgagtctgcgaaatcatct
tcttcctccagcaaagctgaccaatcagatgcaggagtccctatttatttaagcccaatc
aaagaatggcttatagaatttggtggttcaatgatttgtataaccattcgtactgatgtg
gcctggtacaagctacgccaaccgactaagcaatatgctccatggtgtgagcctgtgttg
aaaacagcaaggcttgctgtcagcatcatcaccctgttaaaagagcaaagtcgtgcttca
aagctttcttttgctgatgtcatcaaaaaagtatctgaatttgacaaaggggacccagca
tttatatcgtcaaacatcgcactagttgagaggtacattgtggtacatggacagataata
ctccagcagtttgcagattttccagatgagactatccgtaggagtgcatttgtcagtggg
cttttattgaagatggaacagaggaggcatacaaagttagttatgaagaaaaaaactcaa
gtaatgaggggagagaatctgaacccaagcgcagcaatgggcccagcatcaagaagaaag
gtgatgcgtgcaacaacaaccaggttgatcaacaggatctggagcgattactatgcacat
catttccctgaagataccaaggtgggagatggaaatgaaacaaaagaagttgatgatgaa
caagaagaaaatgaagatgaggatgctgaagatgaggtgcagattgaagaggaaaagatc
tcaaagactccactatccacacggtcccggaagttgctgtcacaatcctgtaaagaaatt
agatgggaaggtgaaatatctgggaaaacatcatctggcgaagctctatacaaatgtgct
tacgttcgagagctcagaatatctgttggaggaacagtggcactagaagatgattcagga
gaaacagtcatctgttttattgagtacatgtttcagaaaaatggtggtgcaaaaatggtt
catggaaggatgctacaaaaaggttcacagacgattctcggcaatgctgcaaatgagagg
gaggttttcttaaccaatgactgcttagaattcaaattagatgacatcaaggaattggtg
actgttgatatccaatcaaggccttggggtcacacttatagaaaagagaattctgaagct
gataaagttgagcaggcaaaagcagaagagagggagaaaaagggcctgccaatggagtat
ttctgcaaaagcttatactggcctgagaagggtgccttcttcacccttccccatgataaa
atgggtcttggtagtggtgtatgtagctcttgtgatcacatagagccagattctgacgaa
ttgaaagtgctctcaaagaccagcttcatctatggaaaggttacatataatgtcaatgac
ttcttatacatgagacctgattttttctctcaagatgaggatcgtgcaaccttcaaggct
ggcagaaatgtgggcctaaagccttatgcagtttgccagctattggccgtccctgaagga
gcaggatctaaaaagctcgatccagcatcaacaaaaatcagtgctagaagattttacaga
ccagatgacatttcatcagccaaagcttatgcatccgacatcagagaggtctactatagt
gaagatataattgatgttcctgtggatatgatagagggaaaatgtgaggttaggaagaag
aatgatctgccaagttcagaccttccagtgatgtttgaacatgtatttttctgcgagctt
atctatgaccgtgccactggagccctcaagcagttgcctccaaatgttaagttcatgtcc
atggtgcaaaaaacaactggtgctttgaaaaagaacaaagggaagcagatctgtgagact
gaccaagtagattcaggtaaatgggttgatgtgccaaaagagaaccgtctagcaactctt
gacatttttgctggctgtggaggtttatcagaagggctgcagcaagctggtgtatctttt
acaaaatgggcaattgaatatgaggagcctgctggtgaagcatttagcaaaaatcatccc
gaggctgtggtgtttgtaaataactgcaatgtgattctaaaggcaattatggataaatgt
ggggatactgatgattgcatttcaacttctgaagctgctgaacaagcagcgaaacttgct
gaagagaacattagtaaccttccagtacctggtgaagtagaattcataaatggtggtcct
ccgtgtcagggattttctgggatgaatagattcaaccaaagcccatggagcaaagttcag
tgcgagatgattctagcattcctctcatttgcagagtatttccgacccagattctttctc
ttagaaaatgttcggaattttgtttcgttcaacaaagggcagacattccgactagcagtt
gcatctcttctggagatgggatatcaggtccgctttggaattctagaagcaggggcgttt
ggtgttgctcagtctaggaaaagggcattcatttgggctgccgcacctggagagactctt
cctgattggccagagccaatgcatgtgtttgctagccctgagctgaagataacactgcct
gatggccaatactacgcagctgccagaagcaccgctggtggagcgcctttccgagcgata
actgttagagatacaattggggatcttcctaaagtggaaaatggtgccagcaaactcaca
cttgagtatggaggtgagcctgtatcttggttccagaaaaagattagagggaatatgatg
acactgaatgatcacatatccaaggagatgaatgagctgaacctcataaggtgccagcac
attccgaaacgaccaggttgtgactggcatgacctgcctgacgagaaggtgaaactgtca
aatgggcagatggcagacctgataccttggtgcctgccgaacactgccaagagacacaat
cagtggaagggtctgtacgggaggctggactgggagggcaacttccccacatctgtcaca
gatccgcaaccaatgggcaaggtcggcatgtgcttccaccctgaacaggacaggatcatc
acagtccgtgaatgcgcccggtctcagggcttccctgacaggtatgagttcgcgggcaac
attcagagcaagcacaggcagatcggcaacgctgtgcccccgcctcttgcctacgccctt
gggaggaagctgaaggaagccgttgacgccaagtgtcaggaggctggtgtggctgcggct
gcaccatga
DBGET
integrated database retrieval system
