Panicum virgatum (switchgrass): 120659916
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Entry
120659916 CDS
T07260
Name
(RefSeq) alpha-galactosidase-like
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00052
Galactose metabolism
pvir00561
Glycerolipid metabolism
pvir00600
Sphingolipid metabolism
pvir00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
120659916
09103 Lipid metabolism
00561 Glycerolipid metabolism
120659916
00600 Sphingolipid metabolism
120659916
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
120659916
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
120659916
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Motif
Pfam:
Melibiase_2
Melibiase_C
Melibiase
Melibiase_2_C
Motif
Other DBs
NCBI-GeneID:
120659916
NCBI-ProteinID:
XP_039794119
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Position
2N:complement(18435426..18439355)
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AA seq
402 aa
AA seq
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MAPPTAVLLLLMVTAGCLADARPRPATDGARRTLLANGLGLTPQMGWNSWNHFQCDINET
VVRSTADALVATGLAKAGYTYVNLDDCWADYQRTKEGHMVANPKTFPSGIKALADYVHSK
GLKLGLYSSAGTRTCSDRMPGSLGHEDTDAKTFASWGVDYLKYDNCYRDGTPETVRFSRM
SRALKSSGRSIFYSLCEWGYMEVAKWGGASGNSWRTTGDINDTWTRMLDNIDRNDAYAQY
AKPGGWNDPDMLEVGNGGMTYDEYVVHLSLWAIAKAPLVIGCDVTGISKEALGILANAEV
IAINQDRLGIQGKKVTKYGNDLEVWGGRLTRHRKAVLLLNRGATRSAPVTAAWPDVGIRP
GVAVEARDVWKHETLPGKFTGSLTAAVEPHSCKLFVLTPVPR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccccgacggcggtcctcctcctgctgatggtgaccgccggatgcctcgccgac
gcgcggccgcgcccggccactgacggcgcccggcgcacgctcctcgccaacgggctcggc
ctgacgccgcagatggggtggaacagctggaaccacttccaatgcgacatcaacgagacc
gtcgtccggagcaccgcggacgcgctcgtcgccaccggcctcgccaaggcaggctacacg
tacgtgaacctagatgactgctgggcagattaccaaaggaccaaagaggggcacatggtc
gctaatcccaagacgttcccatcggggatcaaggccctggcggattatgttcacagcaag
gggctcaagcttggcctctactcttcagctgggacaagaacctgcagcgacaggatgcct
ggatccctgggccacgaggacacggacgccaagaccttcgcgtcatggggtgttgactac
ctgaagtatgacaactgctacagagacggcacgcctgaaaccgtgaggttttcgaggatg
tctcgcgcgctcaagagctccggccgctcgatcttctactccctctgcgaatggggctac
atggaggtggcgaagtggggcggcgcctccggcaacagctggaggaccaccggcgacatc
aacgacacatggacacgcatgctggacaacatcgaccggaacgacgcctacgcccagtac
gccaagcccggcggctggaacgaccctgacatgctggaggtcggcaacgggggcatgacc
tacgacgagtacgtcgtgcacttgagcctgtgggcgatcgccaaggctcctctggtaatc
gggtgcgacgtgacgggcatctccaaggaggcgctggggatcctcgctaacgcagaggtc
atcgcgatcaaccaagaccggctcggcatccagggaaagaaagtgaccaagtatggcaac
gatcttgaggtgtggggcgggcggctcacccggcacaggaaggcggtgctgctgctcaat
cgcggcgcgacgcgctcggcgcccgtcaccgcggcgtggccggacgtcgggatccgcccc
ggcgtcgccgtcgaggccagggacgtctggaagcacgagacgctcccgggcaagttcacc
ggcagcctcacggcggcggtggagccgcactcgtgcaagctcttcgttctcacgcccgtc
ccgcgctga
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