KEGG   Panicum virgatum (switchgrass): 120659956
Entry
120659956         CDS       T07260                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03020  RNA polymerase
pvir03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120659956
  09124 Replication and repair
   03420 Nucleotide excision repair
    120659956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvir03021]
    120659956
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120659956
Transcription machinery [BR:pvir03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     120659956
  RNA polymerase III system
   RNA polymerase III
     120659956
  RNA polymerase I system
   RNA polymerase I
     120659956
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120659956
SSDB
Motif
Pfam: RNA_pol_Rpb6 Merozoite_SPAM DUF6312
Other DBs
NCBI-GeneID: 120659956
NCBI-ProteinID: XP_039794187
LinkDB
Position
2N:19524116..19527568
AA seq 143 aa
MADDDYNDMDMGYEDEPPEPEIEEGAEEELENNNEDAPDDVVGAEVEDKEQEKKARERKT
SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG
SYEDWGVDELIVEDSWKRQVGGD
NT seq 432 nt   +upstreamnt  +downstreamnt
atggcggacgacgactacaacgacatggacatggggtatgaggatgagcccccagaacca
gagattgaggagggggctgaggaggagcttgagaacaacaatgaggacgctcctgatgat
gtggtaggggcagaagttgaagacaaggaacaagaaaagaaggcacgcgagcggaaaaca
tcgaagtatatgacaaagtatgagcgtgcacgcattcttggtacacgtgctttgcagatt
agcatgaatgctccagttatggtcgagcttgaaggggaaactgatcctcttgagattgcc
atgaaagaactgagggcacgcaagatcccattcacaatcaggcgatatttaccagatgga
agctacgaggattggggtgttgatgaactcatcgtggaggactcctggaaacgtcaagtc
ggtggggactaa

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