Panicum virgatum (switchgrass): 120661458
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Entry
120661458 CDS
T07260
Name
(RefSeq) ribosomal RNA small subunit methyltransferase, mitochondrial-like
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120661458
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
120661458
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120661458
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Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_31
UPF0020
PrmA
Ubie_methyltran
MTS
Methyltransf_23
PCMT
CMAS
Methyltransf_4
Met_10
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
120661458
NCBI-ProteinID:
XP_039796261
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Position
2N:59555156..59557747
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AA seq
358 aa
AA seq
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MKRAVSAPWARRTVRQGCFYASSTSTSSSPEAASEKWDGRFRLHKPRGQHLLTNPRVLDA
IARRAAIGPGDAVLEVGPGTGNLTARLLASPASRVAAVEIDPRMVEAVTARAAALGLADK
LTVIAGDAVEVDFPEFDVCVANIPYGISSPLIAKLLFGAYRFRTATLLLQKEFARRLAAA
PGDGEYNRLAANVRLVADVRLLMDVSKRDFVPMPRVDSSLVEIRPRAVAPGVDLGEWLAF
TRACFGQKNKTLGAIFKQKRMVMELFSRSQRAEERDGRAGAVSLSALDDGSDEDSCGEGD
DDGNRAAGCSDEEVAAFKIRIAGALDSAELTGKRPSKLSNDELLQLLRLFNERGVRFR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagccgtctccgctccctgggcccggcgcaccgtccgccagggctgcttctac
gcctcgtccaccagcacctcttcctcgcctgaggcggcgtcggagaagtgggacgggcgg
ttccgcctccacaagccgcgcgggcagcacctgctcaccaacccgcgcgtcctcgacgcc
atcgcgcgccgcgccgcgatcggcccgggcgacgccgtcctcgaggtcggccccggcacg
gggaacctcaccgcgcgcctcctcgcctcccccgcgtcgcgcgtcgccgccgtcgagatc
gacccgcgcatggtcgaggcggtcaccgcgcgcgccgccgcccttgggctagcggacaag
ctcacggtgattgcgggcgacgccgtggaggtggacttcccggagttcgacgtctgcgtg
gccaacatcccctacggcatttcctcgccgctgatcgccaagctgctgttcggcgcctac
cggttccggacggcgacgctgctgctgcagaaggaattcgcgcgccggctcgcggccgcg
ccgggcgacggggagtacaaccgtctggcggccaacgtgcgcctggtcgccgacgtgagg
ctgctcatggacgtgagcaagagggacttcgtgcccatgcctcgggtggattcctccctc
gtcgagatccggccgagggccgtcgcgcccggggtcgaccttggcgagtggctggcgttc
acgcgcgcgtgcttcgggcagaagaacaagaccctcggcgccatcttcaagcagaagagg
atggtcatggagctgttcagccggtcgcagcgcgcggaggaacgcgacggccgcgcgggt
gctgtcagcctcagcgcgcttgacgacggcagtgacgaggattcttgtggagaaggcgac
gatgacggcaacagagcggctggttgcagcgacgaagaggtcgcagcgttcaagattaga
atcgctggagcgttggactctgccgagctcaccggcaagaggccgtccaagctgtccaac
gacgagctgctgcagttgctccggctgttcaatgagcgcggggtgcggttccggtag
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