Panicum virgatum (switchgrass): 120661515
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Entry
120661515 CDS
T07260
Name
(RefSeq) biotin--protein ligase 2-like isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00780
Biotin metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
120661515
Enzymes [BR:
pvir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
120661515
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
120661515
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
120661515
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
120661515
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Motif
Pfam:
BPL_LplA_LipB
BPL_C
BPL_LplA_LipB_2
Papilin_u7
Motif
Other DBs
NCBI-GeneID:
120661515
NCBI-ProteinID:
XP_039796376
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Position
1K:5043925..5047358
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AA seq
379 aa
AA seq
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MPPFPVRFPLPPSTTRAAAAAVGAVIAAVALRRYLSTSRRRPYASAAMSALRSSSAAAGA
ATTLVAYGKSPQDQELLASAAGSLALGEGESAGEVAVALAHEGAGFDAGTYMGALRARRF
GRWMLWSPRVGSTQDLIAQNFAKLPVGVVCVADVQFKGRGRSKNVWESPPGCLMFSFTSQ
MQDVRKLPLMQYVVCLSMTEAIKELCHAKELPELDVRIKWPNDLYLKGLKVGGILCTSSY
EAKVYNICTGIGLNVDNEKPSTCLNAALQQANAISPRLKREDVLAYFFNKFENLFEIFSN
QGFQALEEQYYNSWLHSGQRVVVQDAHEGQSVGSVVTIQGLTPSGYLYAIGEDDKSYELH
PDGNSFDFFTGLVRRKIEA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgttccccgttcgcttcccgctgccgccgtcgacaacccgcgccgccgcggcc
gccgtcggggccgtgatcgccgccgtcgcgctccggcgctacctctccacctcccgccgc
cggccgtacgcctcggcggccatgtccgcgctcaggagcagcagcgccgccgccggagcc
gccaccacgctagtggcgtacggcaagtcgccgcaggaccaggagctcctggcctcggca
gcagggtccctcgccctaggggagggcgagtcggccggggaggtcgccgtcgcgctcgcc
cacgagggcgcggggttcgacgcgggcacgtacatgggcgcgctccgggcgcggcggttc
gggaggtggatgctctggtcgccgagggtcggctccacgcaggacctcatcgcgcagaac
tttgcgaagctgccggtgggcgttgtgtgcgtcgccgacgtgcagttcaaagggagaggc
agatcaaagaatgtgtgggaatcgccaccagggtgtctcatgttctctttcacatcacag
atgcaggatgtgagaaagttacccctcatgcaatatgttgtttgtctttccatgaccgaa
gccatcaaagaactatgccatgctaaggaactaccagaacttgatgtaagaataaagtgg
cctaatgatctctatctgaaaggattaaaagttggcggcattctatgtacctcatcttat
gaagcaaaagtctacaatatttgcaccggtattggtttaaatgttgacaatgagaagcct
tcaacatgcttaaatgctgcgcttcaacaagcaaatgctatatcacccagattgaaacga
gaagatgtactggcatacttcttcaataaattcgaaaatctttttgagatcttctcaaat
caaggatttcaggcccttgaggagcagtactataactcatggcttcacagtggccagaga
gttgtcgtacaagatgcacatgaaggacagtctgtaggcagtgtcgtcactatccagggc
ttaacaccaagtgggtacttatacgctattggcgaggatgacaaatcctatgagttgcac
ccagatggcaacagctttgatttctttactggattggtgaggagaaagattgaagcttag
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