Panicum virgatum (switchgrass): 120662177
Help
Entry
120662177 CDS
T07260
Name
(RefSeq) alpha-galactosidase 3-like
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00052
Galactose metabolism
pvir00561
Glycerolipid metabolism
pvir00600
Sphingolipid metabolism
pvir00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
120662177
09103 Lipid metabolism
00561 Glycerolipid metabolism
120662177
00600 Sphingolipid metabolism
120662177
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
120662177
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
120662177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Melibiase_2
Melibiase_C
Melibiase
Melibiase_2_C
Motif
Other DBs
NCBI-GeneID:
120662177
NCBI-ProteinID:
XP_039797232
LinkDB
All DBs
Position
2N:68906505..68910901
Genome browser
AA seq
426 aa
AA seq
DB search
MEAAARLPLPIISALLLLLILSPAAARVAPSRMQPLATAALRLLYDTSNYGKLQLNNGLA
LTPQMGWNSWNFFACNINETVIRETADALVSTGLAELGYNYLNIDDCWSYVKRRNKDQLL
PDPKNFPSGIKALADYVHGKGLKLGIYSDAGIFTCQVRPGSLYHENDDAALFASWGVDYL
KYDNCYNLGIKPQKRYPPMRDALNSTGRQIFYSLCEWGQDDPALWAGKVGNSWRTTDDIT
DTWKSMTDIADKNNKWASYAGPGGWNDPDMLEVGNGGMTFAEYRSHFSIWALMKAPLLIG
CDVRNMTSETMKILSNKEVIQVNQDPLGVQGRKILGEGKNGCREVWAGPLSGNRLAVALW
NRCSEIANITMKLPAVGLDESAAYSVRDLWKHESLSENVVGTFGAQVDVHDTKMYIFSPA
ISVASI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggctcgcctccccctccccatcatctccgccctcctcctcctgctaatc
ctctcgccggcggcagcgagggtggcgccgtcgcgcatgcagccgctcgccacggccgcg
ctgcgcctcctctacgacacctccaactacggcaagctgcagctcaacaacggcctcgcg
ctcaccccgcagatggggtggaacagctggaatttcttcgcatgcaacatcaacgagacg
gtcatccgcgaaacagctgatgcgctggtgtcgacaggactggctgaattgggctacaac
tatttaaatattgatgattgctggtcctatgtgaaaagaagaaacaaggatcaattgcta
cctgatccaaagaatttcccttcaggcatcaaagctcttgcagactatgtgcacggaaaa
ggtttaaaacttggtatatactcagatgctgggatatttacttgtcaagttcgacctgga
tcgctctatcatgaaaatgatgatgccgcactctttgcttcatggggtgttgactacctg
aagtatgacaactgctacaatctgggaataaagcctcagaaaagatatcctcctatgcga
gatgctcttaattcaactgggcgccaaatattctactctttgtgtgagtggggccaggat
gatccagccttgtgggctggcaaagttggcaatagttggcgtacaacagatgacataacg
gatacatggaaaagcatgacagatattgctgataagaataacaagtgggcatcatatgct
ggacctggtggttggaatgacccagatatgctggaggtagggaatggtggcatgaccttt
gctgagtatcgctcacattttagcatctgggctctcatgaaggcccctctattaattggc
tgtgatgtcagaaatatgacttcagaaacgatgaaaatattgagcaacaaagaagtaatt
caagtaaaccaagatcctcttggagttcaaggaagaaaaattttgggagaaggaaaaaat
ggatgccgcgaggtgtgggctggccccctgtctggaaatcggcttgctgttgctttgtgg
aaccgatgttcggagattgctaatattacaatgaaattgccagcagtaggccttgatgaa
tcagctgcctattctgttagagacctttggaagcatgaatctctatcagaaaatgttgtt
ggaacttttggcgctcaagttgacgtgcatgacacaaagatgtatattttttctccagcc
atcagtgtcgcttcaatttga
DBGET
integrated database retrieval system