Panicum virgatum (switchgrass): 120664563
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Entry
120664563 CDS
T07260
Name
(RefSeq) malate dehydrogenase, mitochondrial-like
KO
K00026
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00020
Citrate cycle (TCA cycle)
pvir00270
Cysteine and methionine metabolism
pvir00620
Pyruvate metabolism
pvir00630
Glyoxylate and dicarboxylate metabolism
pvir00710
Carbon fixation in photosynthetic organisms
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
Module
pvir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pvir_M00012
Glyoxylate cycle
pvir_M00168
CAM (Crassulacean acid metabolism), dark
pvir_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120664563
00620 Pyruvate metabolism
120664563
00630 Glyoxylate and dicarboxylate metabolism
120664563
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
120664563
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120664563
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
120664563
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Motif
Pfam:
Ldh_1_C
Ldh_1_N
Motif
Other DBs
NCBI-GeneID:
120664563
NCBI-ProteinID:
XP_039799760
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Position
3N:15113757..15117991
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AA seq
350 aa
AA seq
DB search
MRSSLLKSTSELLRRTRGYSSSAKPERKVAILGAAGGIGQPLSLLMKLNPLVSSLSLSLY
DIAGTVGVAADVSHINTPAPADWSGVPQVKGFMGDDQLGEALEGSDVVIIPAGVPRKPGM
TRDDLFNINAGIVKALSTAIAKHCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFG
VTTLDVVRAKTFYAGKAGVPVTEVNVPVVGGHAGITILPLFSQATPPSNSLSQEDIVALT
KRTQDGGTEVVEAKAGKGSATLSMAYAGAVFAHACLKGLNGVPDVVECSFVQSTVTELPF
FASKVRLGKNGVEEVFGLGELSDFEKQGLENLKGELKASIEKGIKFAHGN
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgtctctgctgaaatccacgtccgagctcctccgccgcacccgcggttactcc
tcctcggccaaaccggagcggaaggtggccatcctgggcgcggcgggtggcatcgggcag
ccgctctcgctcctcatgaagctcaacccgctcgtctcctccctctccctctccctctac
gatatcgcggggaccgtcggcgtcgccgccgacgtgtcccacatcaacacccccgcccct
gctgattggtctggtgttccgcaggtgaaggggttcatgggggatgaccagctcggggag
gcgctggagggatccgacgtcgttatcatccccgccggggtgcccaggaagcccggcatg
accagggacgaccttttcaacatcaacgctggcattgttaaggcgctcagcaccgccatc
gccaagcactgccccaacgctcttgtcaatatgatcagcaaccctgtcaactccactgtc
ccgattgcagcggaggttttcaagaaggctggtacttatgatgagaagaagctgtttggt
gtgaccactcttgatgttgttcgtgctaaaaccttttatgctggaaaggcaggcgtgcca
gttactgaggtgaatgttcctgttgttgggggccatgcgggtattactattctgccactc
ttctcacaggccactcctccaagcaattcattgtcccaagaagacattgtggccctcacc
aagaggacacaggatggtggaacggaggttgttgaagcaaaggctggaaagggctctgca
acattgtccatggcatatgctggtgctgtttttgcacatgcatgcttgaagggtttgaat
ggagttcctgacgtcgtagagtgctcttttgtgcaatcaactgtgacggagttgcccttc
tttgcctccaaggtacgccttggcaagaatggagtggaggaagtgtttggtctcggagag
ctctccgactttgagaagcaggggttggaaaacctcaagggcgagctcaaggcttccatt
gagaagggtatcaagttcgcccacgggaactag
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