Panicum virgatum (switchgrass): 120669020
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Entry
120669020 CDS
T07260
Name
(RefSeq) indole-3-glycerol phosphate synthase-like
KO
K01609
indole-3-glycerol phosphate synthase [EC:
4.1.1.48
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
Module
pvir_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
120669020
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.48 indole-3-glycerol-phosphate synthase
120669020
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Motif
Pfam:
IGPS
ThiG
Motif
Other DBs
NCBI-GeneID:
120669020
NCBI-ProteinID:
XP_039804788
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Position
2K:complement(16197705..16202560)
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AA seq
381 aa
AA seq
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MEASALAAAVARVASVCAPRSPSSWPTARGARAVRCNATTEQLAVPLCTPELGLGLGAEM
FNSAEVVLWESGKSVNAIAAAQGIRVRRRCRPTHPSEGVGADRAVPRSVLEQIVWDKEVE
VSQRKAAAPLHRVADSARRAPPPRDFAAALRAARARNAGAPALIAEIKKASPTRGLLRDT
FNPVEIAQAYEKNGAACLSILTDEKHFLGSFENLETIRNSGVNCPLLCKDFIIDIWQIYY
AWSKGADAILLIAAVLPDLDIKYMLRVCRSLGMTALVEVHEERELDRVLKIDGVELIGIN
NRSLGTFEVDTSNTNMLLQKRGDIIKKKNIMVVSESGLFTPDDVAYVQNAGVAAVLVGES
LLTQEDPGRAIAGLFGKELLL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggaggcctccgccctcgccgcggccgtcgccagggtggcctctgtatgcgcgccgcgc
tccccgtcgtcgtggccgacggcgcgcggcgcgcgcgccgtccgctgcaacgccaccacc
gagcagctcgctgtgccgctgtgcacgccggagctgggcctgggcctgggcgccgagatg
ttcaactcggcggaggtggtcctgtgggagagcggcaagtccgtcaacgccatcgccgcc
gcgcagggcatccgcgtgcgccgccgctgccgccccacccacccctccgagggcgtcggc
gccgaccgggccgtcccgcgcagcgtcctcgagcagatcgtctgggacaaggaggtcgag
gtgtcccagcgcaaggccgccgcgccgctccacagggtcgccgactccgcgcggcgcgcg
ccgccgcccagagacttcgccgccgcgctgcgcgccgcgcgcgcccgcaacgccggcgcc
cccgcgctcatcgccgagatcaagaaggcgtcgccgaccaggggcctgctcagggacacc
ttcaacccggtcgagattgcgcaggcctacgagaagaatggcgccgcctgcttgagcatc
ctcactgacgagaagcactttctggggagcttcgagaatctggagaccatacgcaactcc
ggtgtgaattgccctctactctgcaaggacttcatcatcgacatctggcagatctactat
gcgtggtcgaaaggcgctgatgcgatcctcctgatcgccgccgtgctaccagaccttgac
atcaagtacatgcttcgtgtttgcaggagtcttggaatgacagctcttgttgaggttcat
gaagagagggagttggatcgcgtactgaagatagacggcgtggaactaattggcatcaac
aatcgcagtctagggacatttgaagtcgatacttcaaacacaaacatgttgttacagaaa
cgtggtgacatcattaagaagaagaacataatggttgtgagcgaatccggattgtttacg
cctgatgatgtagcatatgtgcagaatgctggtgttgcagctgttttggtaggagagtcc
ctattgacgcaggaagatcctggacgagcaatcgctgggctgtttgggaaggaactctta
ctctaa
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