Panicum virgatum (switchgrass): 120669614
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Entry
120669614 CDS
T07260
Name
(RefSeq) dynamin-2A-like
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120669614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120669614
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120669614
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
120669614
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
120669614
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
120669614
RhoA-dependent endocytosis
120669614
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120669614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_N
Dynamin_M
GED
PH
MMR_HSR1
PH_11
PH_8
PH_20
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
120669614
NCBI-ProteinID:
XP_039805347
LinkDB
All DBs
Position
4N:complement(10661775..10670629)
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AA seq
917 aa
AA seq
DB search
MEAIEELSELSESMRQAASLLADDDPSDDAAPRRPTTFLNAVALGNVGAGKSALLNSLIG
HPVLPTGENGATRAPIVVDLQREPGLSSKSIVLQVDSKSQQVSASALRHSLQDRLSKGAS
GGSGRGRADEIYLKLRTSTAPPLKLIDLPGIDQRAVDDSMINEYAGHNDAILLVVIPAMQ
AADVASSRALRLAKDIDSDGTRTVGVISKVDQANGDAKTIACVQALLSNKGPKNLPDIEW
VALIGQSVAIASAQSVGSENSLETAWRAEAESLKNILTSAPQNKLGRLALVDTIAKQIRK
RMKVRLPNLLSGLQGKSQMVQDELARLGESMVQSPEGTRAVALELCREFEDKFLAHITSG
EGSGWKIVASFEGKFPDRIKQLPLDRHFDLNNVKRIVLEADGYQPYLISPEKGLRSLIKI
VLEMAKEPSRLCVEEVHRVLLDIVNASANATPGLGRYPPFKREVVAIASNALESFKNDAK
KMVVALVDMERAFVPPQHFIRLVQRRMERQRREDELKNRSSKKTQEAEQSTSKRASSPQT
DSEQGGGSLKSMKDKSGQQDKDKQDKDTKEGSNLQVAGPAGEITAGYLLKKSAKTNGWSK
RWFVLNEKSGKLGYTKKQEERHFRGVITLEECNLEEVEEEPSKSSKDSKKANGPEKTPSL
VFKITNRVAYKTVLKAHSAVVLKAESMADKVEWVNKIKAVIQSKGGSFKGPNTEGGSMRQ
SHSDGSLDTMARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDML
NQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSSLLSKLTRQLSIHDNRASVSSYSN
DTCEAESPRIPSRSGEDWRSAFDSASNGPAAASSNSESRSRSADGRSRRYENGDVSTGAN
SGNRRTPNRLPPAPPRY
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatagaggagctgtccgagctctccgagtcgatgcgccaggcggcgtcgctc
ctcgccgacgacgacccctccgacgacgccgcgccgcgtcgccccaccaccttcctcaac
gccgtcgcccttggcaacgtcggagcaggcaagtcggccttgctgaacagcctcatcggt
cacccggtcctgccgacaggggagaacggggcaacgcgggcgccgatagtggtggacctg
cagagggagccgggtctcagcagcaagtccatcgtgctccaggtcgacagcaagtcacag
caggtgtccgcaagtgccctccggcattcactgcaggacagactcagcaagggggcgtct
ggtggatcagggaggggccgcgctgatgagatttacctcaagctgcggacgagtacagct
cccccattaaagctgattgatttacctgggatagaccagcgagctgttgatgattccatg
atcaatgagtatgctgggcacaatgatgcaatactgcttgttgtgatacctgcaatgcaa
gctgctgatgtcgcatcatctcgagctctaaggctggccaaggatattgattcagatggg
acgagaactgttggtgttataagcaaagttgatcaagcaaatggagatgcaaaaactata
gcttgtgttcaggctctactgtcaaacaagggcccaaaaaaccttccagacattgagtgg
gttgctctaataggacaatctgttgcaattgcgtcagcgcaatcagttgggtctgaaaac
tcgctagaaacagcttggcgagctgaagctgaaagcctgaaaaacatcttaactagtgct
cctcagaataagcttggcagacttgctttggttgacaccattgcaaagcagatacgtaaa
agaatgaaagtgcggcttcctaacctattgagtggccttcagggtaaatctcagatggtg
caagatgaactagcaagactaggagagtctatggtgcaaagtcccgaaggaaccagggca
gttgctttggagctatgccgggaatttgaagataaatttcttgctcatataacatctggt
gagggatctggttggaaaattgttgcaagctttgaaggcaagtttccagatagaattaaa
cagctaccattggacaggcattttgatctcaacaatgtcaaaaggattgtcttggaagcc
gatggttatcaaccatatttgatatctccagagaaaggactgagatccttaataaaaata
gtactggaaatggcaaaggagccatcacgactatgtgttgaagaggttcatcgtgtattg
ttagacatagtcaatgcttctgcaaatgccacaccaggacttggaaggtatcctccattc
aagcgtgaggttgttgcaatagcatcaaatgcactcgagagcttcaaaaacgatgccaag
aagatggttgtagcacttgttgatatggagcgtgcctttgttcctcctcaacattttatc
cgcttagtgcaaagaagaatggaaaggcagcgtcgcgaggatgagttaaaaaatcgatct
tctaagaaaacacaagaggctgaacagtcaacgtcaaagagggcctccagtccgcaaaca
gactctgagcaaggtggtggcagcttaaaatcaatgaaagacaaatctggtcagcaagat
aaagacaagcaagataaagacacaaaagagggatcgaatttgcaggttgctggtcctgct
ggtgaaattactgcaggttacctcttaaagaaaagcgcaaaaactaatggctggagcaaa
aggtggtttgttcttaatgagaagagtggaaagcttggatacacaaaaaaacaagaggag
agacattttcgtggtgtcatcactcttgaggagtgcaaccttgaggaggtagaggaggaa
ccttctaaaagttcaaaggattcaaaaaaggcaaatggaccagaaaaaactccaagtctt
gtgtttaagataaccaatagggttgcttacaaaacagtcctcaaagctcacagtgccgtt
gtattaaaggctgagagcatggctgacaaggttgagtgggtaaataagatcaaagctgtt
attcagagcaaaggcggttctttcaagggtcctaatactgagggtggttcaatgaggcaa
agccattcggatggctccttagatactatggcacggagacctgctgatccagaagaagaa
cttagatggatgtctcaagaagttcgtggttatgttgaggctgttttgaatagtcttgca
gcaaatgttccaaaggccattgtgctttgccaagtggagaaagcaaaggaagatatgctt
aaccagctatacagctcaataagtgggcaaagcaatgctaagattgaggagcttctccaa
gaagaccataatgctaagcgcagaagggagaagtaccaaaaacaatcatctctcctgtca
aaacttactcgtcaactcagtatccatgacaacagggcatctgtttcctcttattctaac
gacacctgtgaagctgagagccctcgaatacccagccgctcaggtgaggactggaggtct
gccttcgattctgcatctaatgggcctgctgctgccagctcaaacagcgagtcaaggtcg
agaagcgctgatggtcgcagccggcgctacgagaatggggatgtgagcacaggtgccaac
tctggcaaccgacgcacgccaaaccggttgcctccagcaccaccaagatactag
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