Panicum virgatum (switchgrass): 120669690
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Entry
120669690 CDS
T07260
Name
(RefSeq) DNA-directed RNA polymerases I and III subunit rpac1-like
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120669690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120669690
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
120669690
RNA polymerase I system
RNA polymerase I
120669690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Fer4_7
Fer4_9
Motif
Other DBs
NCBI-GeneID:
120669690
NCBI-ProteinID:
XP_039805441
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All DBs
Position
2K:complement(17500091..17504475)
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AA seq
371 aa
AA seq
DB search
MPKKGSKSKKAVDDVADQQEKKLPDYLELQRTHVVCNADAPIHTQGYQYSGTFAAVGIDN
SVSVEKFCKNFKIDIKRLTEDDMEFDMIGVDASIANAFRRILIAEVPTMAIEKIFMADNT
SVIADEVLSHRLGLIPLDADPRLFDYISENDVPNERNTIVFKLHVSCEKGSQRITVKSGE
LEWLPEGSQLSMASPAQSGDKQKTFTSFSQSQKEILEKPLGVKFKDITIARLGPGQAIEL
EAHAVKGVGKVHAKWSPVATAWYRMLPEVVFLEQIEGDEAEELVKKCPVNVFDIEDLGNG
GKRAVVAKPRACTLCRECVRGPSGGKIQLRRVRDHFIYTIESTGALPPEVLFTEAVKILE
EKCERVISELS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagaagggcagcaaatccaagaaggcggtggacgatgttgcagatcaacaagaa
aaaaagcttccggattaccttgagctccagcgcacccatgttgtgtgcaatgcggatgcc
cctattcatactcaaggttaccaatactcgggtacttttgctgctgtggggattgataat
agtgtgtcagtggagaaattttgcaagaacttcaaaattgatataaagcgtctcactgaa
gatgatatggagtttgatatgattggtgttgatgcatcgatagctaatgctttccggaga
atcctcatcgcagaggttccaactatggccatagagaaaatcttcatggctgacaacacc
tcagttatagcagatgaggttctttcacatagactaggacttattccacttgatgcagat
ccaaggctttttgactatatctcagaaaatgatgttccaaatgaaaggaatactattgtt
tttaaactgcatgtttcatgtgaaaagggttctcagcgaattacagtgaaatctggtgaa
ctagagtggttgccagaaggtagccaattaagcatggcatctcctgcgcagtctggggac
aaacagaagactttcacttccttcagtcaaagccaaaaggagatcttagaaaagcctctc
ggtgtgaagtttaaagatataactattgccaggcttgggccaggacaggctattgagctc
gaggcacatgctgttaagggagttgggaaagttcatgccaagtggtctccagttgctacg
gcctggtacagaatgctcccagaggttgtttttcttgaacaaattgaaggtgatgaggct
gaggagctcgtgaagaagtgcccagttaatgtttttgatattgaagacctgggtaatggt
ggaaagagggcagttgtggcaaagccaagggcttgcacactctgtagagaatgcgtcagg
ggaccatctggggggaaaatccaactaaggcgtgttagagaccatttcatatataccatc
gagtcgacgggagctctgcccccagaggtgctattcacagaagccgtgaagattttggaa
gagaaatgcgagagggtcatatctgagctatcctga
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