Panicum virgatum (switchgrass): 120671531
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Entry
120671531 CDS
T07260
Name
(RefSeq) (R)-mandelonitrile lyase-like
KO
K08248
(R)-mandelonitrile lyase [EC:
4.1.2.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00460
Cyanoamino acid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
120671531
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.10 (R)-mandelonitrile lyase
120671531
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GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
DAO
FAD_binding_2
Pyr_redox_2
Lycopene_cycl
NAD_binding_8
HI0933_like
ThiF
GIDA
FAD_oxidored
Motif
Other DBs
NCBI-GeneID:
120671531
NCBI-ProteinID:
XP_039807830
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Position
4N:44274098..44277252
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AA seq
561 aa
AA seq
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MCGLGSAGAPPVYARYLVDAAAMPAVELYDYIVVGGGTAGCPLAATLAGSGGGRVLLLER
GGAPSEFPALATAGGFVRTLAMADPAPESDAPAQGFTSEDGVPNVRARVLGGGTAINAGF
YSRAHPEWFRGHDAENTEVTNWDMRLVNASYEWVERHMTFQPTVRGFQAAVRAALLEANV
TPWNGFTVDHVAGTKVSATTFDASGRRHSAADLLAFARPSRLRVATRATVTRIITNPIDP
AARHGRSPQPTIAAIGVVYQDRLLDQHQALLRPGGEVILSAGALGSPQLLLLSGIGPASD
LSYLGIPVSADLPDVGKHMFDNPRNGISIIPSVPIDHSLIQVVGIPSANGAASYLEAASY
IVPLAPALRSAGPFIGSSSPLYVTVATIMEKVPGPLSEGSLWLSSTNPLESPPLRFNYLS
RPEDLARCVLGVRRVAQVLEGRALDGFRSPVGSDNRRAAVRRDFRIVGMALPVEWRTDDR
ALANYCQQTVATLWHYHGGCVAGKVVDRDFRVIGTRALRVVDASTFSETPGTNPQATVLM
MGRYVGLKMIERHSGRPVIPS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggcttgggttccgcaggggcgccgccggtgtacgcgcggtacctggtcgacgcg
gcggcgatgccggcggtggagctgtacgactacatcgtggtgggcggcggcacggcgggg
tgcccgctcgcggcgacgctggcggggtccggcggcgggcgcgtgctcctgctcgagcgc
ggcggcgcgcccagcgagttccccgcgctcgccacggccggcgggttcgtccggacgctc
gccatggccgacccggccccggagtccgacgcacccgcgcaggggttcacgtccgaggac
ggcgtccccaacgtgcgcgcgcgcgtgctcggcggaggcacggccatcaacgccggcttc
tactcgcgcgcgcacccggaatggttccgcggccacgacgccgagaacaccgaggtgacg
aactgggacatgcggctggtgaacgcgtcgtacgagtgggtggagaggcacatgacgttc
cagccgacggtgcgcgggttccaggcggcggtgagggcggcgctcctggaagccaacgtc
acgccgtggaacggcttcacggtggaccacgtcgccggcaccaaggtcagtgccaccacc
ttcgatgcatcgggccggcggcacagcgccgcggacctgctcgcctttgcccgtcctagc
cgtctccgtgtcgccacccgtgctacagttactcgtatcatcaccaacccgattgaccct
gctgcacgccatggaagatctccacaaccaacaatagcagcaattggtgttgtgtaccag
gaccgtctcctcgatcagcaccaagccctcctgcgcccaggtggggaggtaatactttca
gcaggtgccctggggagtccccagctgcttcttctaagcggcattggccctgccagtgat
ctttcctacctcggcatccctgtctctgccgatctccctgatgttggcaagcacatgttc
gacaaccctcgcaacggcatctccatcatcccatcagtcccgatcgatcactccctcatc
caggtcgtcggcatcccttcagccaatggagctgcctcctaccttgaggcggcatcgtac
attgtcccactagctccggcgttgagatcagctggtcctttcatcggctcgtcttcacca
ctctatgttacagtggcaactatcatggagaaggtccctggacctttgtctgaaggttcg
ctatggctctcatcaacgaatccattggagagcccccctctgcggttcaactacttgagt
cgccctgaggatttggcgcgctgcgtcctgggcgtgcgccgtgtggcacaagtgcttgaa
ggcagagcattggacgggttccgctcaccggttggatcggataaccggagagcggcagtt
aggagggatttcaggattgttgggatggcgctgccggtagaatggagaacggatgacaga
gctctagcaaattactgccagcagaccgtggccacgctgtggcattatcatggagggtgc
gtcgccggcaaggtggttgatagagattttcgggtgattggcacccgtgcacttcgtgtg
gttgatgcttcaacattcagtgagacacctgggacgaacccgcaagctacagtcttgatg
atgggcaggtatgtggggttgaagatgattgagagacacagcggaaggccagttatacca
tcatag
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