Panicum virgatum (switchgrass): 120672204
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Entry
120672204 CDS
T07260
Name
(RefSeq) heat shock 70 kDa protein BIP4-like
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03060
Protein export
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
120672204
04141 Protein processing in endoplasmic reticulum
120672204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120672204
04131 Membrane trafficking [BR:
pvir04131
]
120672204
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120672204
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
120672204
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP70 / DNAK
120672204
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
120672204
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120672204
Exosomal proteins of other body fluids (saliva and urine)
120672204
Exosomal proteins of colorectal cancer cells
120672204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
FtsA
Hydantoinase_A
DDR
Motif
Other DBs
NCBI-GeneID:
120672204
NCBI-ProteinID:
XP_039808447
LinkDB
All DBs
Position
5N:34407727..34409730
Genome browser
AA seq
667 aa
AA seq
DB search
MALLARVWTLLFALLVAGLVAAPIVYAAPADGSAADKNTGTVIGIDLGTTYSCVGVYRNG
HVEIIANDQGNRITPSWVAFTGGGERLIGEAAKNQAAANPERTIYDAKRLIGRQFADAVV
QRDMKLLPYAVVDRNGKPHVRVQVRDGDVREFSPEEVSAMVLTKMKETAEAYLGEKVTHA
VVTVPAYFNDAQRRATKDAGVIAGLTVLRTVNEPTAAAIAYGLDQKGAEKNVLVFDLGGG
TFDVSVLAIDNGVFEVLATNGDTHLGGEDFDQRVMDYFIKLIKRKHGRDISGDARALGKL
RRECERAKRALSNQHQVRVEIEALFDGVDFSEQLTRARFEELNNDLFRKTMVPVKKAMAD
AGLNKADIDEIVLVGGSTRIPKVQQLLKDYFNGKEPNKGVNPDEAVAYGAAVQASILSGH
IDNNTQGMILLDVAPLTLGMETVGGVMTKLITRNTVVPTKKTQVFTTYQDRQTTVSIKVF
EGERSMTKDNRLLGKFDLAGIPPAPRGTPQIEVTFEVDANGILHVQAADKGTGKSEKITI
TSDDRRLSQDEIDRMVREAEEFAEEDRKVRERVDARNKLEAYVYQVKSAVDGGKMADAMD
AEEKEKMEEAVRGANEWLDGNSDADKEDYEEKLKELEDVCNPVISAVYQRSAGTQEDNEE
EDDHDEL
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctagctcgcgtgtggacgcttctgttcgcgctacttgtcgccggtctcgtc
gcggccccgatcgtctacgctgcaccggctgacggatcagcggccgacaagaacaccggc
accgtcatcggcatcgacctgggcaccacctactcctgcgtcggcgtctaccggaacggc
cacgtcgagatcatcgccaacgaccagggcaaccggatcacgccctcctgggtcgccttc
accggcggcggcgagcgcctcatcggcgaggccgccaagaaccaggcggcggccaacccg
gagcgcaccatctacgacgccaagcggctcatcggccgccagttcgccgacgccgtggtg
cagcgcgacatgaagctgctgccctacgccgtcgtggacaggaacggcaagccgcacgtg
cgggtccaggtcagggacggcgacgtgcgggagttcagccccgaggaggtcagcgccatg
gtgctcaccaagatgaaggagaccgccgaggcctacctcggcgagaaggtcacgcacgcc
gtcgtcaccgtcccggcctacttcaacgacgcgcagcgccgggccaccaaggacgccggc
gtcatcgccggcctcaccgtgctccgcaccgtcaacgagcccaccgcggccgccatcgcc
tacggcctcgaccagaagggcgccgagaagaacgtcctcgtcttcgacctcggcggcggc
acgttcgacgtcagcgtcctggccatcgacaacggcgtcttcgaggtgctcgccaccaac
ggcgacacccacctcggcggcgaggacttcgaccagcgcgtcatggactacttcatcaag
ctcatcaagcgcaagcacggccgcgacatctccggcgacgcccgcgcgctggggaagctg
cgccgcgagtgcgagcgcgccaagcgcgcgctcagcaaccagcaccaggtgcgcgtcgag
atcgaggcgctcttcgacggcgtcgacttctcggagcagctgaccagggcgcgcttcgag
gagctcaacaacgacctgttccggaagacgatggtgcccgtgaagaaggccatggcggac
gccggcctgaacaaggccgacatcgacgagatcgtgctcgtcggcggcagcaccaggatc
cccaaggtgcagcagctgctcaaggactacttcaacggcaaggagcccaacaagggggtc
aaccccgacgaggccgtcgcgtacggcgccgctgtccaggccagcatcctcagcgggcat
atcgacaacaacacccaaggcatgatcctcctcgacgtcgcgccgctgacgctgggcatg
gagaccgtcggcggggtgatgaccaagctcatcacgaggaacacggtggtgccgacgaag
aagacgcaggtgttcaccacgtaccaggacaggcagaccacggtgagcatcaaggtgttc
gagggcgagcggagcatgaccaaggacaacaggctgctcggcaagttcgacctcgccggg
atcccgccggcgcccaggggcacgccgcagatcgaggtgaccttcgaggtggacgcgaac
ggcatcctccacgtgcaggcggcggacaagggcaccggcaagtcggagaagatcaccatc
acgagcgacgaccgccggctcagccaggacgagatcgaccggatggtgcgcgaggcggag
gagttcgcggaggaggaccggaaggtgagggagcgggtcgacgcgcgcaacaagctggag
gcgtacgtctaccaggtcaagagcgcggtggacggcggcaagatggccgacgcgatggat
gctgaggagaaggagaagatggaggaggcagttaggggagcgaacgagtggctggacggt
aactcggatgctgacaaggaggactacgaggagaagctcaaggagctggaggacgtctgc
aaccctgtcatctcggcggtgtaccagaggtccgccggtacccaggaagacaacgaagaa
gaggatgatcatgatgagctttaa
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