Panicum virgatum (switchgrass): 120672798
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Entry
120672798 CDS
T07260
Name
(RefSeq) glutamine--tRNA ligase-like
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00970
Aminoacyl-tRNA biosynthesis
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120672798
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120672798
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120672798
Enzymes [BR:
pvir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
120672798
Amino acid related enzymes [BR:
pvir01007
]
Aminoacyl-tRNA synthetase
Class I (A)
120672798
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120672798
Prokaryotic type
Other AARSs
120672798
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C2
tRNA-synt_1c_C
tRNA_synt_1c_R2
Motif
Other DBs
NCBI-GeneID:
120672798
NCBI-ProteinID:
XP_039809324
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Position
5N:4750092..4757343
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AA seq
796 aa
AA seq
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MGTGGDGEKAAPALPLEALLALGLDQRTAENALVNSKVTANLAAVIAEAGIKECDKSVGN
LLYAVATKYPTNALVHRPALIKYVLSTKIKNPAQLDAALSFLSNTGPDSLDVKKFEEACG
VGVVVSIEEIKSTVTDVLEENMEAIKEQRYHINVGTLCGQVRKRHPWGDAKAIKEEIDRR
LAEILGPKTEADNIKPVKKKKEKPVKVEEKKVEVATSAPPSEEELNPYTIFPQPEENFKV
HTEIFFSSGNIWRAHNTKELLEKHLKATGGKVMTRFPPEPNGYLHIGHAKAMFIDFGLAK
ERNGHCYLRFDDTNPEAEKKEYIDHIQEIVHWMGWEPYKVTYTSDYFQALYEHAIELIRK
GLAYVDHQTAEEIKEYREKKMNSPWRDRPIEESLKLFEDMRRGLIAEGAATLRMKQDMQN
ENKNMSDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCMVDSLENITHSLCTLEFDIRRPSY
YWLLVALGLYQPYVWEYSRLNISNTVMSKRKLNRLVTEKWVDGWDDPRLLTLAGLRRRGV
SSTAINSFIRGIGITRSDNSLIRVDRLEYHIREELNKTAPRTMVVLRPLKVVITNLEEGK
VLDLDGKMWPDASDTDASSHYKVPFSRTVYIEKTDFRLKDSKDYYGLAPGKSVMLRYAFP
IKCTDVIYGDSPDDIVEIRAEYDPLKTSKLKGVLHWVAEPTPGVEPLKVEVRLFEKLFMS
ENPGELENWLGDLNPNSKEVIKDAYAVPSLATAVLGDKFQFERLGYFAVDTDSTPEKLVF
NRTVTLRDSFGKAGPK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgggggagacggggagaaggcggcgccggcgctgccgctggaggcgctgctg
gcgctcgggctcgaccagcgcaccgcggagaacgcgctcgtcaacagcaaggtcaccgcc
aacctcgccgccgtcatagccgaggctggtataaaggaatgtgacaaatcagttggcaat
cttctctatgcagtcgccactaagtacccaactaatgcacttgttcatcgtcctgccctt
attaaatatgtcttgtcaacaaagataaagaaccctgcacaactggatgctgctctgtca
tttctttctaatactggtcctgattctctggatgtcaagaagtttgaagaagcatgtggt
gtaggtgtggttgtttctattgaggagattaagtcaactgttactgatgtacttgaggag
aatatggaagctataaaggagcagcggtatcacataaatgttggtaccctatgcggacag
gttaggaagagacacccgtggggtgatgctaaggcaataaaggaggaaattgacaggagg
cttgcagaaatactaggcccgaagacagaagctgacaatataaaacctgtgaaaaagaag
aaggaaaaaccagtaaaagtcgaggagaaaaaagttgaagttgccacttctgctccacca
tctgaggaggaattgaacccatatactatatttccccagccagaagaaaactttaaggtt
catacagaaatatttttcagcagtggaaatatatggagagcacataacacaaaagaactt
ttagaaaaacatctgaaggcaactggaggaaaagtgatgacccgtttcccaccagaacct
aatggatatcttcatattggtcatgccaaggccatgtttattgattttgggctggcgaag
gagcgaaatggtcattgctaccttaggtttgatgacacaaatccagaagctgaaaagaaa
gagtatatagatcacattcaggaaattgtccattggatgggatgggagccctacaaagta
acatacactagtgactatttccaagctttgtatgagcatgctattgagttaatacggaaa
gggctagcctacgtggatcaccagactgctgaagaaatcaaggagtacagggaaaagaag
atgaatagtccatggagagataggccaattgaagagtcactgaaattgtttgaagacatg
aggcgtgggttgattgctgagggtgcagcaactctccgaatgaagcaggacatgcagaat
gagaacaaaaatatgtctgacttaatagcatatagaataaaattcacccctcatccacat
gctggcgacaagtggtgtatctatccaagttatgactacgctcattgcatggtggattct
cttgaaaacatcacacattcgttgtgcacgcttgagtttgacattcgtcgcccttcatac
tactggctgcttgttgccttgggcctctatcagccatatgtgtgggaatattcgaggctg
aacatatcaaatactgtgatgtctaaaagaaagttgaatcgacttgtgacggagaaatgg
gtagatgggtgggatgatccccgcttgttgacattggcaggactccggcggcggggagta
tcatcaactgcgattaattcgtttatccgtggaattggcataacaagaagtgacaatagc
ttaattcgcgttgaccgcctggaatatcacatcagggaagagcttaacaaaacagctcct
cgaaccatggttgttttgcgccctctaaaggttgtaataaccaacttggaagaaggaaaa
gtactggacctagatgggaaaatgtggcctgatgcttctgatactgatgcttcctcccac
tataaggttcctttctcaagaactgtctacattgagaaaactgattttcgcctaaaggac
tcaaaagattactatgggctagcccctggtaaatctgtcatgctaaggtatgcattcccc
ataaaatgcacagatgttatctatggtgatagtcctgatgatattgtcgaaattcgagct
gaatatgaccctttgaagacttctaaacttaagggtgttctgcactgggttgctgagcca
acacctggcgtcgagcctttaaaggtggaagttagattgttcgaaaaactgttcatgtca
gagaatcccggtgaattggaaaattggctgggggatcttaacccgaactcaaaagaggtg
ataaaggatgcttatgctgtaccgtcacttgccactgcagttctgggtgacaagttccag
tttgagcgccttggctactttgctgtggatactgactccacgccggagaagcttgtgttc
aacagaacagttaccctccgtgattcatttgggaaagctggacccaagtga
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