Panicum virgatum (switchgrass): 120674134
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Entry
120674134 CDS
T07260
Name
(RefSeq) probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial
KO
K01952
phosphoribosylformylglycinamidine synthase [EC:
6.3.5.3
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00230
Purine metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
120674134
Enzymes [BR:
pvir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.3 phosphoribosylformylglycinamidine synthase
120674134
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Gene cluster
GFIT
Motif
Pfam:
GATase_5
AIRS_C
FGAR-AT_N
FGAR-AT_linker
DUF4989
Motif
Other DBs
NCBI-GeneID:
120674134
NCBI-ProteinID:
XP_039811191
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Position
5N:69105007..69111743
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AA seq
1418 aa
AA seq
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MASPGQMTASNLLHTKGFPGNMGKQYGLIGARSLGSRSLRMSQRCFHQQHLCWPRAQRVM
VRNIRMSSSPGTVVSEGFDSPLVEKSDSALNGGIIHLYRIPFLQESETMELLKKVKAKVS
ANIADIMTEQCFNIQLDNPLTPEKLSTLHWLLAETYEPEKLQTRSFLEEEVSRISSAVIV
EVGPRMTFSTAFSSNAVSICKSISLVEVARLERSRRYLLRLEPGSDPLDESQLKEFSALV
HDRMTECVYPNKLTSFQSDVVPEPVRVVPVIERGKEALEEINVKMGLAFDKQDIDYYTHL
FRDDIKRNPTTVELFDIAQSNSEHSRHWFFNGKLLIDGETMPNTLFQLVKRPLKANPNNS
VIGFKDNSSAIKGFPVNQLRPTIPGSTSPLSIMMRELDILFTAETHNFPCAVAPYPGAET
GAGGRIRDTHATGKGSFVVASTAGYCVGNLRIESSYAPWEDPSFSYPVNLASPLQILVDA
SDGASDYGNKFGEPLIQGYTRTFGMRLLNGERREWLKPIMFSGAIGQIDHAHISKGDPEI
GMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRVVRACAEMG
ENNPIVSIHDQGAGGNCNVVKEIIYPKGAEIDIRSVVVGDHTLSVLEIWGAEYQEQDALL
VKPESRSLLESLCQRERVSMAVIGKIDGCGKIVLIDSAAVEHAKLNGLPPPNPVEELELE
KVLGDMPQKTFEFKRVSQVTEPLEIAPEVTLLDTLKRVLRLPSVCSKRFLTTKVDRCVTG
LVAQQQTVGPLQIPLADVAVIAQTYTDLTGGACSIGEQPIKGLLNPKAMARLAVGEALTN
LVWAKVTSLADVKASGNWMYAAKLDGEGADMYDAAVALADCMIELGIAIDGGKDSLSMAA
QCDGEVIKAPGNLVISTYVTCPDITLTVTPDLKLGNDGILLHIDLAKGNRRLGGSALAQA
FDQIGNDCPDIDDVPYLKKVFEAIQELITQRLISAGHDISDGGLIVSVLEMAFAGNCGLK
LDIDLEDRSLLEGLFAEELGLVIEVKSQYLNVVKQKLEAAGVSANVIGEVTSSPDIEVFV
DGNLHLKEKTSDLRDLWEETSFQLEESQRLKSCVKLEKEGLKSRTSPSWSLSFTSKFTDE
NLLIASLKPKVAIIREEGSNGDREMAAAFHAAGFEPWDITMSDLLAGKSSLTDFRGIAFV
GGFSYADVLDSAKGWAASIRFNQPLIQQFQDFYHRPDTFSLGVCNGCQLMALLGWVPGSD
IGGSLGLGGEMSQPRFIHNKSGRFECRFTSVSIGNSPAIMFKGMEGSTLGVWSAHGEGRA
FFPDEDVLATVVKSNLAPVRYCDDANNITETYPFNPNGSPLGIAALCSPDGRHLAMMPHP
ERCFMMWQYPWYPKEWQVEKSGPSPWLRMFQNAREWCS
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacctggccaaatgacggcaagcaatctgttacacaccaaaggctttcctgga
aatatgggaaaacaatatggtttaattggtgctcgaagtcttgggtcaagaagtctgcga
atgagtcaacgctgctttcatcagcagcatctttgttggccacgtgcacaaagagttatg
gttcgtaatatcagaatgtcatcatctcctggcactgtggtatccgaggggtttgacagt
ccattagttgagaaatctgattctgcattgaatggtggaattattcacttgtaccgtata
ccatttcttcaagaaagtgaaaccatggagctgcttaagaaagtgaaggccaaggtttct
gctaatattgccgatataatgactgagcagtgcttcaacattcagttggacaatccactt
actcctgagaagctttccacgcttcactggctcttagcagaaacttatgaacctgagaag
ttgcaaactaggagctttctggaggaggaagtgtctagaatttcaagtgctgtcattgtt
gaggttggtccccggatgacattttcgactgcattctcatccaatgctgtctctatctgt
aaatctatctcattagtagaagtggctcgactggagagatcaagaagatatcttttgcgc
cttgagcctggtagtgacccgcttgatgaaagtcagctcaaagaattctctgcgttggtt
catgatagaatgacagagtgtgtctatcccaacaagctcacatcatttcagtcagatgta
gttcctgaacctgtccgtgttgttccagtcattgaaaggggaaaagaagcattggaagaa
ataaatgtgaagatggggcttgcttttgataaacaagatattgactactatacacacctc
ttcagagacgatatcaaacgcaacccaactactgtggaactttttgatattgcacaatcc
aatagtgaacacagcagacattggttttttaatggaaagcttttaatagatggagaaacc
atgccaaacactttgttccagttagtgaagagacccttgaaggccaaccccaataactct
gtcattggattcaaggataattcgagtgcaataaaaggattcccagtaaatcagctgcgt
ccaacaattccgggttccacttcaccattatccatcatgatgcgtgagcttgatatttta
ttcacagcagagacccataattttccatgtgctgttgcaccataccctggagccgagaca
ggtgcaggtggccgtataagagacacacatgccactgggaagggttcatttgttgttgct
tccactgctggttactgtgttggtaatcttcgaattgaaagttcatacgcaccctgggag
gacccttcattttcttacccagtgaacctagcatctccattgcaaattcttgttgatgct
agtgatggggcgtctgactatgggaacaagtttggtgagcctctaattcagggatatacc
agaacatttgggatgaggttgctaaatggcgagcggcgtgagtggttgaagccgataatg
ttcagtggagctattgggcaaattgaccatgcacacatatcaaagggtgatccagaaatt
ggcatgctagttgtgaagattggtggtccagcatacagaattggtatgggcggtggtgct
gcctcaagtatggttagtggccagaacgatgcagagcttgatttcaatgcagttcagcgt
ggagatgctgagatggcacagaaattgtatcgtgtggtcagggcatgtgcagaaatggga
gagaataaccccatcgtcagcattcatgatcagggtgcaggaggaaattgtaatgttgtg
aaggaaataatatatcctaagggtgctgaaattgatatccgctcagttgtcgttggtgat
catacattgtcggtcttggagatatggggtgctgagtaccaggagcaggatgcactactt
gtgaaacctgagagcagaagccttctggagtcgctttgtcagagggaaagggtttcaatg
gctgtcattgggaaaattgatggctgtggaaaaattgtgttgattgatagcgctgctgtg
gagcatgccaagttgaatggccttcctcctccaaaccctgttgaagaacttgagcttgaa
aaagttctaggagatatgcctcagaagaccttcgagttcaagcgtgtttctcaagtcaca
gagcctttagaaattgcaccagaggtaacactgctggatactctgaagcgagtattaagg
ctcccatccgtctgttcaaagcgtttcttaaccacaaaagttgataggtgtgtgacaggt
cttgttgcacaacagcagacagttgggcctcttcaaatcccgcttgctgatgtggctgtg
attgcacagacatacacggacctcacaggtggtgcttgcagcattggagaacagccaata
aagggtttgcttaatcctaaggccatggctagacttgctgttggggaggccttgactaat
cttgtttgggcaaaggttacatcgcttgctgatgtcaaagcaagcgggaactggatgtat
gctgcaaagcttgacggtgaaggtgcagatatgtatgatgcagctgttgcattggctgac
tgcatgattgaacttggtattgcaatagatgggggaaaggacagtctttccatggcagct
caatgtgatggtgaggtcatcaaagctcctggaaatctggttattagtacttatgtcaca
tgtcctgatataacattgacagtaacccctgatttgaagcttggtaatgatggaattctt
ctgcatattgacctcgctaaaggtaatcgccgtcttggtggttctgctcttgcacaagca
tttgatcaaattggaaatgactgcccagacattgatgatgtgccgtacttgaagaaagta
tttgaggccattcaggaactgattactcaacggcttatttcagcaggccatgacataagt
gatggtggccttattgtgagtgtccttgagatggcatttgctggtaattgtggtttaaag
ctggatatagacttggaagataggagccttcttgaaggactttttgcagaggagcttggt
ctcgttattgaagtgaaatcacaatatctcaatgtcgtgaagcaaaagcttgaagcagca
ggcgtttccgctaatgtaattggagaggttactagctcgccggatatagaagtttttgtt
gatggcaatctgcatctcaaggaaaaaacttcagatctcagggatctctgggaggaaacg
agcttccagcttgaggagtcacaacgcctgaaatcttgtgtcaaacttgagaaagaaggg
ctaaaaagcagaacgtcaccatcatggtctctgtccttcacttccaaattcacagatgag
aatcttttgattgcatccttgaaaccaaaggtcgctatcattcgtgaagaagggagcaat
ggtgacagggaaatggctgctgcatttcatgctgctggatttgaaccatgggatatcaca
atgtcagacctcttggctgggaagtcctctctaacggatttccgtggaattgcatttgtt
ggtggtttcagctatgcagatgtgctggactcagcaaaaggctgggctgcatcaatcaga
tttaaccaacccctcattcagcaattccaggatttctaccataggccagacactttcagc
cttggagtatgcaatggttgccaacttatggctcttcttggctgggtgccaggatcagat
attggaggttctcttggcttaggtggagaaatgtcccagccaaggtttattcacaacaaa
tctggtcgttttgaatgtcggtttaccagtgtgtccattgggaattctcctgcaatcatg
ttcaaagggatggaaggttctaccttgggtgtttggagtgctcatggtgagggaagagct
ttcttcccagatgaagatgttctagctactgttgtgaagtctaatctggctcctgtgcga
tattgcgatgatgctaacaatataactgagacctatcccttcaatcccaatggttctcca
ctaggcattgcagccctttgctcccctgatggaaggcaccttgccatgatgccacaccca
gagcgttgcttcatgatgtggcaatatccatggtatccaaaggaatggcaggttgagaag
agtggccccagcccttggctgcggatgttccagaatgctcgagaatggtgctcgtag
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integrated database retrieval system
