Panicum virgatum (switchgrass): 120674323
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Entry
120674323 CDS
T07260
Name
(RefSeq) frataxin, mitochondrial-like
KO
K19054
frataxin [EC:
1.16.3.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00860
Porphyrin metabolism
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
120674323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120674323
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.16 Oxidizing metal ions
1.16.3 With oxygen as acceptor
1.16.3.1 ferroxidase
120674323
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
120674323
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GFIT
Motif
Pfam:
Frataxin_Cyay
RdRP_5
Motif
Other DBs
NCBI-GeneID:
120674323
NCBI-ProteinID:
XP_039811429
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Position
5N:59766787..59768630
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AA seq
199 aa
AA seq
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MASRKLLLSLTAGRRLRSRTQQLFCAASLPEATTSRSLAAAVAAAQQSGGSPVAHLFSSR
TISSTRPATQSARDAPSSSAVDHHKLVMPEDEFHKLADETIHDLLEKLEEYGDSIQMDGF
DIDYGNQVLTLRLGDLGTYVVNKQTPNRQIWLSSPVSGPSRFDWDASTDGWVYKRTGANL
VQLLEKEIGELCGTPVELS
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcgcaagcttctcctgagcctcaccgccgggaggcggctccggtcccgcact
caacaactcttctgcgccgccagtctccctgaagctaccacctctcgctccctcgcggcc
gccgttgccgccgcgcagcagtcgggcgggtcgccagtggctcatctcttctcttcgagg
accatctcgtcgacgcgccccgcgacacagtccgctcgagatgcgcccagttcatctgcg
gtggaccaccacaagttggtaatgcctgaggacgagtttcataaattagcagatgagacg
attcacgatttgcttgaaaaacttgaggaatatggtgactccattcagatggatggtttc
gacattgactacgggaatcaggttttgacattgaggcttggggatttgggaacatatgtt
gtaaacaagcaaacaccaaacagacaaatctggttatcttcacctgtgagtgggccttct
aggtttgattgggatgcatcaacagatggttgggtatacaaacggaccggagcaaatctt
gtgcagcttctggaaaaggagattggtgagctctgtggtaccccagtagaactttcataa
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