Panicum virgatum (switchgrass): 120675687
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Entry
120675687 CDS
T07260
Name
(RefSeq) ribosomal RNA small subunit methyltransferase-like
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120675687
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
120675687
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120675687
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Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_31
Methyltransf_23
FtsJ
PrmA
PCMT
MTS
CMAS
PRMT5
Motif
Other DBs
NCBI-GeneID:
120675687
NCBI-ProteinID:
XP_039812819
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Position
5N:27025242..27027331
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AA seq
358 aa
AA seq
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MAGGKIQKKRHGAGAAGGGGGARLQGGIPFEKSKGQHILRNPALVDSIVAKAGLKPTDTV
LEIGPGTGNLTKRLLEAGVKAVVAVELDPRMVLELNRRFQGHPLSSRLKVIQGDVLKCDL
PYFDICVANIPYQISSPLTFKLLSHRPIFRCAVIMFQREFAMRLVAQPGDSLYCRLSVNV
QLLSRVSHLLKVGRNNFRPPPKVDSSVVRIEPRKPLPPVSFKEWDGLVRICFNRKNKTLG
SLFKQKRVLELLEKNYKTMQSLQLAQDAEMGEEKMSADDVALLANMVEDLSMEIGDEKED
EMEMDDADMAGDGAASFKEKIMGILQQGDFAEKRGSKLSQVDFLYLLSLFNKAGIHFS
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggcaagatacagaagaagcgccacggcgcgggggccgccggaggtggcggc
ggtgcgcggctgcagggcggcatcccgttcgagaagtccaaggggcagcacatcctgcgg
aatccggctctggtggactccatcgttgccaaggcaggcctcaagcccactgacacagtc
ctcgagatcgggcccgggacgggtaatcttacgaagcgcctcctcgaggcaggagtgaag
gcagtcgtcgccgtcgagctggacccgcgcatggtgctcgagctcaaccgccggttccag
gggcacccgctctcctcgcgactgaaggttatccaaggagacgtcctcaaatgtgatctc
ccttactttgatatatgtgtggcaaatatcccataccagatttcttcacccctcacgttc
aagcttctgtcgcaccgtccaatctttaggtgtgctgtgatcatgtttcagcgtgaattt
gccatgaggcttgtagcacagcctggagacagtctctactgtcgtctctctgttaatgtc
cagcttttgtcacgagtgtcacatcttttaaaggttgggaggaacaactttaggcctcca
cccaaggttgactcatcagtagtgcgcatcgagcccaggaagccccttcctccggtcagt
ttcaaggagtgggatggacttgtgaggatttgtttcaaccggaagaacaaaactttgggc
tccctctttaaacagaagcgtgttcttgagttgctagagaagaactacaagactatgcag
tctctgcagcttgctcaagatgcagaaatgggtgaggagaagatgtctgctgatgatgtt
gcattgctagctaatatggttgaagatctgagcatggagattggagatgagaaggaagat
gaaatggaaatggatgatgcggacatggcaggagatggtgctgcaagctttaaagaaaag
attatgggtatattgcagcagggtgattttgcagaaaagagaggttctaagctgagccag
gtcgatttcttatacttgctgtctcttttcaacaaggctggtatacatttctcatga
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